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IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org

Citing IMGT/GENE-DB : Giudicelli, V. et al. Nucleic Acids Res., 33: D256 - D261 (2005). PMID: 15608191

IMGT/GENE-DB program version: 3.1.19 (21 June 2018)
IMGT/GENE-DB data updates

IMGT/GENE-DB reference sequences in FASTA format:

Amino acids sequences with gaps according to the IMGT unique numbering
for F+ORF+in-frame P with IMGT Gaps alleles including orphons


The FASTA header contains 15 fields separated by '|':

1. IMGT/LIGM-DB accession number(s)
2. IMGT gene and allele name
3. species
4. IMGT allele functionality
5. exon(s), region name(s), or extracted label(s)
6. start and end positions in the IMGT/LIGM-DB accession number(s)
7. number of nucleotides in the IMGT/LIGM-DB accession number(s)
8. codon start, or 'NR' (not relevant) for non coding labels
9. +n: number of nucleotides (nt) added in 5' compared to the corresponding label extracted from IMGT/LIGM-DB
10. +n or -n: number of nucleotides (nt) added or removed in 3' compared to the corresponding label extracted from IMGT/LIGM-DB
11. +n, -n, and/or nS: number of added, deleted, and/or substituted nucleotides to correct sequencing errors, or 'not corrected' if non corrected sequencing errors
12. number of amino acids (AA): this field indicates that the sequence is in amino acids
13. number of characters in the sequence: nt (or AA)+IMGT gaps=total
14. partial (if it is)
15. reverse complementary (if it is)

Number of results = 21
>M21626|TRAV14/DV4*01|Homo sapiens|F|V-REGION|226..515|290 nt|1| | | |96 AA|96+12=108| | |
AQKITQTQPGMFVQEKEAVTLDCTYDTSDP.....SYGLFWYKQPSSGEMIFLIYQGSY.
.DQQNATE.....GRYSLNFQKARKSANLVISASQLGDSAMYFCAMRE
>AE000659|TRAV14/DV4*02|Homo sapiens|F|V-REGION|179711..180000|290 nt|1| | | |96 AA|96+12=108| | |
AQKITQTQPGMFVQEKEAVTLDCTYDTSDQ.....SYGLFWYKQPSSGEMIFLIYQGSY.
.DEQNATE.....GRYSLNFQKARKSANLVISASQLGDSAMYFCAMRE
>M21624|TRAV14/DV4*03|Homo sapiens|(F)|V-REGION|131..412|282 nt|1| | | |94 AA|94+12=106| | |
AQKITQTQPGMFVQEKEAVTLDCTYDTSDP.....SYGLFWYKQPSSGEMIFLIYQGSY.
.DQQNATE.....GRYSLNFQKARKSANLVISASQLGDSAMYFCAM
>L09758|TRAV14/DV4*04|Homo sapiens|[F]|V-REGION|1..271|271 nt|1| | ||90 AA|90+13=103|partial in 5' and in 3' | |
.QKITQTQPGMFVQEKEAVTLDCTYDTSDQ.....SYGLFWYKQPSSGEMIFLIYQGSY.
.DEQNATE.....GRYSLNFQKARKSANLVISASQLGDSAMYF
>AE000660|TRAV23/DV6*01|Homo sapiens|F|V-REGION|90991..91270|280 nt|1| | ||93 AA|93+14=107| | |
QQQVKQSPQSLIVQKGGISIINCAYENTA......FDYFPWYQQFPGKGPALLIAIRPD.
..VSEKKE.....GRFTISFNKSAKQFSLHIMDSQPGDSATYFCAAS
>M17660|TRAV23/DV6*02|Homo sapiens|(F)|V-REGION|85..364|280 nt|1| | ||93 AA|93+14=107| | |
QQQVKQSPQSLIVQKGGIPIINCAYENTA......FDYFPWYQQFPGKGPALLIAIRPD.
..VSEKKE.....GRFTISFNKSAKQFSLHIMDSQPGDSATYFCAAS
>M97704|TRAV23/DV6*03|Homo sapiens|(F)|V-REGION|145..424|280 nt|1| | ||93 AA|93+14=107| | |
QQQVKQSPQSLIVQKGGISIINCAYENTA......FDYFPWYQQFPGKGPALLIAIRPD.
..VSEKKE.....GRFTISFNKSAKQFSLHIMDSQPGDSATYFCAAS
>Y10411|TRAV23/DV6*04|Homo sapiens|[F]|V-REGION|1..267|267 nt|1| | | |89 AA|89+15=104|partial in 5' and in 3' | |
.QQVKQSPQSLIVQKGGISIINCAYENTA......FDYFPWYQQFPGKGPALLIAIRPD.
..VSEKKE.....GRFTISFNKSAKQFSLHIMDSQPGDSATYFC
>AE000660|TRAV29/DV5*01|Homo sapiens|F|V-REGION|167519..167798|280 nt|1| | | |93 AA|93+14=107| | |
DQQVKQNSPSLSVQEGRISILNCDYTNSM......FDYFLWYKKYPAEGPTFLISISSI.
..KDKNED.....GRFTVFLNKSAKHLSLHIVPSQPGDSAVYFCAAS
>S81645|TRAV29/DV5*02|Homo sapiens|F|V-REGION|174..452|279 nt|1| | | |93 AA|93+14=107| | |
DQQVKQNSPSLSVQEGRISILNCDYTNSM......FDYFLWYKKYPAEGPTFLISISSI.
..KDKNED.....GRFTVFLNKSAKHLSLDIVPSQPGDSAVYFCAAS
>AE000660|TRAV36/DV7*01|Homo sapiens|F|V-REGION|230905..231181|277 nt|1| | | |92 AA|92+15=107| | |
EDKVVQSPLSLVVHEGDTVTLNCSYEVTN......FRSLLWYKQEKKAP.TFLFMLTSS.
..GIEKKS.....GRLSSILDKKELSSILNITATQTGDSAIYLCAVE
>X61070|TRAV36/DV7*02|Homo sapiens|(F)|V-REGION|7..280|274 nt|1| | | |91 AA|91+15=106| | |
EDKVVQSPQSLVVHEGDTVTLNCSYEMTN......FRSLQWYKQEKKAP.TFLFMLTSS.
..GIEKKS.....GRLSSILDKKELFSILNITATQTGDSAVYLCAV
>X58767|TRAV36/DV7*03|Homo sapiens|(F)|V-REGION|109..378|270 nt|1| | ||90 AA|90+15=105|partial in 3'| |
EDKVVQSPLSLVVHEGDTVTPNCSYEVTN......FRSLLWYKQEKKAP.TFLFMLTSS.
..GIEKKS.....GRLSSILDKKELFSILNITATQTGDSAVYLCA
>Z46643|TRAV36/DV7*04|Homo sapiens|(F)|V-REGION|87..357|271 nt|1| | | |90 AA|90+15=105| | |
EDKVVQSPLSLVVHEGDTVTLNCSYEVTN......FRSLLWYKQEKKAP.TFLFMLTSS.
..GIEKKS.....GRLSSILDKKELFSILNITATQTGDSAVYLCA
>AE000661|TRAV38-2/DV8*01|Homo sapiens|F|V-REGION|34309..34597|289 nt|1| | | |96 AA|96+12=108| | |
AQTVTQSQPEMSVQEAETVTLSCTYDTSES.....DYYLFWYKQPPSRQMILVIRQEAY.
.KQQNATE.....NRFSVNFQKAAKSFSLKISDSQLGDAAMYFCAYRS
>M22198|TRDV1*01|Homo sapiens|F|V-REGION|363..649|287 nt|1| | | |95 AA|95+13=108| | |
AQKVTQAQSSVSMPVRKAVTLNCLYETSWW.....SYYIFWYKQLPSKEMIFLIRQG...
....SDEQNAKS.GRYSVNFKKAAKSVALTISALQLEDSAKYFCALGE
>X15207|TRDV2*01|Homo sapiens|F|V-REGION|208..495|288 nt|1| | | |96 AA|96+12=108| | |
AIELVPEHQTVPVSIGVPATLRCSMKGEAI....GNYYINWYRKTQGNTITFIYREK...
....DIYGPGFK.DNFQGDIDIAKNLAVLKILAPSERDEGSYYCACDT
>Y13426|TRDV2*02|Homo sapiens|F|V-REGION|1..283|283 nt|1| | ||94 AA|94+13=107|partial in 5' and in 3' | |
.IELVPEHQTVPVSIGIPATLRCSMKGEAI....GNYYINWYRKTQGNTITFIYREK...
....DIYGPGFK.DNFQGDIDIAKNLAVLKILAPSERDEGSYYCACD
>AE000661|TRDV2*03|Homo sapiens|F|V-REGION|176712..176999|288 nt|1| | | |96 AA|96+12=108| | |
AIELVPEHQTVPVSIGVPATLRCSMKGEAI....GNYYINWYRKTQGNTMTFIYREK...
....DIYGPGFK.DNFQGDIDIAKNLAVLKILAPSERDEGSYYCACDT
>M23326|TRDV3*01|Homo sapiens|F|V-REGION|303..592|290 nt|1| | | |96 AA|96+10=106| | |
CDKVTQSSPDQTVASGSEVVLLCTYDTVYS.....NPDLFWYRIRPDYSFQFVFYGDN..
...SRSEGADFTQGRFSVKHILTQKAFHLVISPVRTEDSATYYCAF
>X15261|TRDV3*02|Homo sapiens|F|V-REGION|316..605|290 nt|1| | | |96 AA|96+10=106| | |
CDKVTQSSPDQTVASGSEVVLLCTYDTVYS.....NPDLFWYWIRPDYSFQFVFYGDN..
...SRSEGADFTQGRFSVKHILTQKAFHLVISPVRTEDSATYYCAF


Authors: Hugo Duvergey, Denis Moreno, Mansour Saljoqi, Véronique Giudicelli and Marie-Paule Lefranc

IMGT/GENE-DB scientific responsibles: Véronique Giudicelli (Veronique.Giudicelli@igh.cnrs.fr) and Marie-Paule Lefranc (Marie-Paule.Lefranc@igh.cnrs.fr)


-> IMGT/GENE-DB Documentation
-> IMGT/GENE-DB Query page
-> IMGT/GENE-DB direct links
-> IMGT/GENE-DB statistics
-> IMGT/GENE-DB program versions
-> IMGT/GENE-DB data updates

Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001); Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003); Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5, 45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text, Lefranc, M.-P. et al., Nucleic Acids Research 2009 37(Database issue): D1006-D1012; doi:10.1093/nar/gkn838 Full text.
For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.

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