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IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org

Citing IMGT/GENE-DB : Giudicelli, V. et al. Nucleic Acids Res., 33: D256 - D261 (2005). PMID: 15608191

IMGT/GENE-DB program version: 3.1.19 (21 June 2018)
IMGT/GENE-DB data updates

IMGT/GENE-DB reference sequences in FASTA format:

Amino acids sequences with gaps according to the IMGT unique numbering
for F+ORF+in-frame P with IMGT Gaps alleles including orphons


The FASTA header contains 15 fields separated by '|':

1. IMGT/LIGM-DB accession number(s)
2. IMGT gene and allele name
3. species
4. IMGT allele functionality
5. exon(s), region name(s), or extracted label(s)
6. start and end positions in the IMGT/LIGM-DB accession number(s)
7. number of nucleotides in the IMGT/LIGM-DB accession number(s)
8. codon start, or 'NR' (not relevant) for non coding labels
9. +n: number of nucleotides (nt) added in 5' compared to the corresponding label extracted from IMGT/LIGM-DB
10. +n or -n: number of nucleotides (nt) added or removed in 3' compared to the corresponding label extracted from IMGT/LIGM-DB
11. +n, -n, and/or nS: number of added, deleted, and/or substituted nucleotides to correct sequencing errors, or 'not corrected' if non corrected sequencing errors
12. number of amino acids (AA): this field indicates that the sequence is in amino acids
13. number of characters in the sequence: nt (or AA)+IMGT gaps=total
14. partial (if it is)
15. reverse complementary (if it is)

Number of results = 28
>M12832|TRGV1*01|Mus musculus_BALB/c|F|V-REGION|148..446|299 nt|1| | | |99 AA|99+9=108| | |
LGQLEQTELSVTRETDESAQISCIVSLPYF....SNTAIHWYRQKAKK.FEYLIYVST..
..NYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVWI
>AF021335|TRGV1*02|Mus musculus|F|V-REGION|39912..40210|299 nt|1| | | |99 AA|99+9=108| | |
LGQLEQTELSVTRETDESAQISCIVSLPYF....SNTAIHWYRQKAKK.FEYLIYVST..
..NYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVWI
>M26763|TRGV1*03|Mus musculus_BALB/c|(F)|V-REGION|44..340|297 nt|1| | | |99 AA|99+9=108| | |
LGQLEQTELSVTRETDESAQISCIVSLPYF....SNTAIHWYRQKAKK.FEYLIYVST..
..NYNQRPLGGKNKKIEASKDFQTSTSTLEINYLKKEDEATYYCAVWI
>X03802|TRGV1*04|Mus musculus_C57BL/10|(F)|V-REGION|136..428|293 nt|1| | ||97 AA|97+9=106| | |
LGQLEQTELSVTRATDESAQISCIVSLPYF....SNTAIHWYRQKAKK.FEYLIYVST..
..NYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAV
>U07554|TRGV1*05|Mus musculus_AKR|(F)|V-REGION|31..330|300 nt|1| | | |100 AA|100+9=109| | |
LGQLKQTEVSVTRATDESAQISCIASLPDF....GNTEIHWYRQKAKQ.FEYLIYVQT..
..NYNQRPLGGKHKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVWIS
>M77017|TRGV1*06|Mus musculus_DBA/2|(F)|V-REGION|1..291|291 nt|1| | | |97 AA|97+11=108|partial in 5'| |
..QLEQTELSVTRETDESAQISCIVYLPYF....SNTAIHWYRQKAKK.FEYLIYVST..
..NYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVWI
>Z22847|TRGV1*07|Mus musculus_C57BL/10|(F)|V-REGION|1..291|291 nt|1| | | |97 AA|97+11=108|partial in 5'| |
..QLEQTELSVTRETDESAQISCIVSLPYF....SNTAIHWYRQKAKK.FEYLIYVST..
..NYNQRPLGGKNKKIEASKDFQSSTSTLKINYLKKEDEATYYCAVWI
>Z48588|TRGV1*08|Mus musculus_L-I|(F)|V-REGION|1..290|290 nt|1| | | |96 AA|96+11=107|partial in 5'| |
..QLKQTEVSVTRETDESAQISCIASLPDF....GNTEIHWYRQKAKQ.FEYLIYVQT..
..NYNQRPLGGKHKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVW
>M12831|TRGV2*01|Mus musculus_BALB/c|F|V-REGION|525..826|302 nt|1| | | |100 AA|100+8=108| | |
LGQLEQTELSVTRETDENVQISCIVYLPYF....SNTAIHWYRQKTNQQFEYLIYVAT..
..NYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCAVWM
>M54996|TRGV2*02|Mus musculus|(F)|V-REGION|160..461|302 nt|1| | ||100 AA|100+8=108| | |
LGQLEQTELSVTRQTDENVQISCIVYLPYF....SNTAIHWYRQKTNQQFEYLIYVAT..
..NYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWM
>X03985|TRGV2*03|Mus musculus_BALB/c|(F)|V-REGION|47..346|300 nt|1| | | |100 AA|100+8=108| | |
LGQLEQTELSVTRETDENVQISCIVYLPYF....SNTAIHWYRQKTNQQFEYLIYVAT..
..NYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCAV*C
>Z48589|TRGV2*04|Mus musculus_L-I|(F)|V-REGION|1..296|296 nt|1| | | |98 AA|98+10=108|partial in 5'| |
..QLEQTELSVTRETDESVQISCIVFLPYF....SNTAIHWYRQKTNQQFEYLIYVAT..
..NYNQRPLEGKNKKIEASKDFKTSTSTLKINYLKKEDEATYYCAVWM
>U07555|TRGV2*05|Mus musculus_AKR|[F]|V-REGION|1..220|220 nt|1| | | |73 AA|73+17=90|partial in 5'| |
.........SVTRETDESVQISCIVFLPYF....SNTAIHWYRQKTNQQFEYLIYVAT..
..NYNQRPLEGKNKKIEASKDFKTSTSTLK
>AF037352|TRGV3*01|Mus musculus|F|V-REGION|66251..66552|302 nt|1| | | |100 AA|100+8=108| | |
LGQLEQTELSVTRATDESAQISCIVSLPCF....SNTAIHWYRQKPNQQFEYLIYVET..
..NYNQQPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVWI
>M12833|TRGV3*02|Mus musculus_BALB/c|F|V-REGION|1..86|86 nt|1| | | |28 AA|28+80=108|partial in 5'| |
............................................................
....................DFQTSTSTLEINYLKKEDEATYYCAVWI
>U07556|TRGV3*03|Mus musculus_AKR|[F]|V-REGION|1..220|220 nt|1| | | |73 AA|73+17=90|partial in 5'| |
.........SVTRATDESAQISCIVSLPYF....SNSVIHWYRQKPNQQFEYLIYVET..
..NYNQQPLGGKNKKIEASKDFKSSTSTLK
>AF037352|TRGV4*01|Mus musculus|F|V-REGION|8460..8761|302 nt|1| | | |100 AA|100+8=108| | |
HGKLEQPEISISRPRDETAQISCKVFIESF....RSVTIHWYRQKPNQGLEFLLYVLA..
..TPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYG*
>M30171|TRGV4*02|Mus musculus_BALB/c|(F)|V-REGION|1..296|296 nt|1| | | |98 AA|98+10=108|partial in 5'| |
..KLEQPEISISRPRDETAQISCKVFIESF....RSVTIHWYRQKPNQGLEFLLYVLA..
..TPTHVFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYGQ
>M26765|TRGV4*03|Mus musculus_C57BL/10|(F)|V-REGION|1..273|273 nt|1| | | |90 AA|90+19=109|partial in 5'| |
...........FRARDETAQISCKVFIKSF....RSVTIHWYRQKPNQSLEFLLYVLA..
..TPTHIFLDKEYKKMEASKDPSASTSILTIYSLEEEDEAIYYCSYG*I
>Z12299|TRGV4*04|Mus musculus_DBA/2|(F)|V-REGION|1..288|288 nt|1| | | |96 AA|96+13=109|partial in 5'| |
.....QPEISISRARDETAQISCKVFIESF....RSVTIHWYRQKPNQGLEFLLYVLA..
..TPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYA*Y
>Z48590|TRGV4*05|Mus musculus_L-I|(F)|V-REGION|1..287|287 nt|1| | | |95 AA|95+13=108|partial in 5'| |
.....QPEISISRARDETAQISCKVFIESF....RSVTIHWYRQKPNQGLEFLLYVLA..
..TPTHIFLDKEYKKMEASKNPSASTSTLTIYSLEEEDEAIYYCSYG*
>AF037352|TRGV5*01|Mus musculus|F|V-REGION|15678..15970|293 nt|1| | | |97 AA|97+11=108| | |
DSWISQDQLSFTRRPNKTVHISCKLSGVPL....HNTIVHWYQLKEGEPLRRIFYGS...
...VKTYKQDKSHSRLEIDEK.DDGTFYLIINNVVTSDEATYYCACWD
>D29793|TRGV6*01|Mus musculus_C57BL/6|F|V-REGION|2057..2363|307 nt|1| | | |102 AA|102+6=108| | |
TSLTSPLGSYVIKRKGNTAFLKCQIKTSVQK...PDAYIHWYQEKPGQRLQRMLCSSSK.
..ENIVYEKDFSDERYEARTWQSDLSSVLTIHQVREEDTGTYYCACWD
>AF037352|TRGV6*02|Mus musculus|F|V-REGION|13868..14174|307 nt|1| | | |102 AA|102+6=108| | |
SSLTSPLGSYVIKRKGNTAFLKCQIKTSVQK...PDAYIHWYQEKPGQRLQRMLCSSSK.
..ENIVYEKDFSDERYEARTWQSDLSSVLTIHQVTEEDTGTYYCACWD
>M13338|TRGV6*03|Mus musculus_BALB/c|(F)|V-REGION|10..315|306 nt|1| | | |102 AA|102+6=108| | |
TSLTSPLGSYVIKRKGNTAFLKCQIKTSVQK...PDAYIHWYQEKPGQRLQRMLCSSSK.
..ETIVYEKDFSDERYEARTWQSDLSSVLTIHQVTEEDTGTYYCACWD
>Z48592|TRGV6*04|Mus musculus_L-I|(F)|V-REGION|1..295|295 nt|1| | | |98 AA|98+10=108|partial in 5'| |
....SPLGSYVIKRKGNTAFLKCQIKTGVQK...PDAYIHWYQEKPGQHLQRMLCSSSK.
..ENIVYEKDFSDERYEARTWQSDLSSVLTIHQVTEEDTGTYYCACWD
>D29794|TRGV7*01|Mus musculus_C57BL/6|F|V-REGION|2393..2688|296 nt|1| | | |98 AA|98+10=108| | |
SSNLEERIMSITKLEGSSAIMTCDTHRTG.......TYIHWYRFQKGRAPEHLLYYNFV.
.SSTTVVDSRFNSEKYHVYEG.PDKRYKFVLRNVEESDSALYYCASWA
>AF037352|TRGV7*02|Mus musculus|F|V-REGION|1465..1760|296 nt|1| | | |98 AA|98+10=108| | |
SSNLEERIMSITKLEGSSAIMTCDTHRTG.......TYIHWYRFQKGRAPEHLLYYNFV.
.SSTTVVDSRFNLEKYHVYEG.PDKRYKFVLRNVEESDSALYYCASWA


Authors: Hugo Duvergey, Denis Moreno, Mansour Saljoqi, Véronique Giudicelli and Marie-Paule Lefranc

IMGT/GENE-DB scientific responsibles: Véronique Giudicelli (Veronique.Giudicelli@igh.cnrs.fr) and Marie-Paule Lefranc (Marie-Paule.Lefranc@igh.cnrs.fr)


-> IMGT/GENE-DB Documentation
-> IMGT/GENE-DB Query page
-> IMGT/GENE-DB direct links
-> IMGT/GENE-DB statistics
-> IMGT/GENE-DB program versions
-> IMGT/GENE-DB data updates

Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001); Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003); Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5, 45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text, Lefranc, M.-P. et al., Nucleic Acids Research 2009 37(Database issue): D1006-D1012; doi:10.1093/nar/gkn838 Full text.
For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.

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