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Citing IMGT/GENE-DB
: Giudicelli, V. et al. Nucleic Acids Res., 33: D256 - D261 (2005).
PMID: 15608191
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IMGT/GENE-DB program version: 3.1.19 (21 June 2018)
IMGT/GENE-DB data updates
The FASTA header contains 15 fields separated by '|': 1. IMGT/LIGM-DB accession number(s) 2. IMGT gene and allele name 3. species 4. IMGT allele functionality 5. exon(s), region name(s), or extracted label(s) 6. start and end positions in the IMGT/LIGM-DB accession number(s) 7. number of nucleotides in the IMGT/LIGM-DB accession number(s) 8. codon start, or 'NR' (not relevant) for non coding labels 9. +n: number of nucleotides (nt) added in 5' compared to the corresponding label extracted from IMGT/LIGM-DB 10. +n or -n: number of nucleotides (nt) added or removed in 3' compared to the corresponding label extracted from IMGT/LIGM-DB 11. +n, -n, and/or nS: number of added, deleted, and/or substituted nucleotides to correct sequencing errors, or 'not corrected' if non corrected sequencing errors 12. number of amino acids (AA): this field indicates that the sequence is in amino acids 13. number of characters in the sequence: nt (or AA)+IMGT gaps=total 14. partial (if it is) 15. reverse complementary (if it is)
>M64239|TRAJ11*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|72734..72792|59 nt|2| | | |19 AA|19+0=19| | | DSGYNKLTFGKGTVLLVSP >M64239|TRAJ12*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|72149..72207|59 nt|2| | | |19 AA|19+0=19| | | GTGGYKVVFGSGTRLLVSP >M64239|TRAJ13*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|71338..71394|57 nt|3| | | |18 AA|18+0=18| | | NSGTYQRFGTGTKLQVVP >M64239|TRAJ15*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|70014..70073|60 nt|3| | | |19 AA|19+0=19| | | YQGGRALIFGTGTTVSVSP >X03057|TRAJ16*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|81..141|61 nt|1| | | |20 AA|20+0=20| | | ATSSGQKLVFGQGTILKVYL >M64239|TRAJ17*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|67370..67432|63 nt|3| | | |20 AA|20+0=20| | | TNSAGNKLTFGIGTRVLVRP >M64239|TRAJ18*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|66372..66437|66 nt|3| | | |21 AA|21+0=21| | | DRGSALGRLHFGAGTQLIVIP >M64239|TRAJ19*01|Mus musculus_B10.D2-H2dm1|ORF|J-REGION|65983..66043|61 nt|1| | | |20 AA|20+0=20| | | IYRGFHKFSSGIESKHNVSP >M64239|TRAJ2*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|83418..83483|66 nt|3| | | |21 AA|21+0=21| | | NTGGLSGKLTFGEGTQVTVIS >M38103|TRAJ2*02|Mus musculus_B10.A|F|J-REGION|36..98|63 nt|3| | | |20 AA|20+0=20| | | NTGLSGKLTFGEGTQVTVIS >M64239|TRAJ20*01|Mus musculus_B10.D2-H2dm1|P|J-REGION|65039..65098|58 nt|3| | | |18 AA|18+0=18| | | SGNYKLGVESVTMMSVRA >M64239|TRAJ21*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|64387..64443|57 nt|3| | | |18 AA|18+0=18| | | SNYNVLYFGSGTKLTVEP >X52448|TRAJ21*02|Mus musculus_C57BL/10|(F)|J-REGION|363..417,a|55 nt|1| |1||18 AA|18+0=18| | | SNYNVLYFGSGSKLTVEP >M64239|TRAJ22*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|62853..62912|60 nt|3| | | |19 AA|19+0=19| | | SSGSWQLIFGSGTQLTVMP >M64239|TRAJ23*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|61686..61745|60 nt|3| | | |19 AA|19+0=19| | | NYNQGKLIFGQGTKLSIKP >M64239|TRAJ24*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|61244..61305|62 nt|2| | | |20 AA|20+0=20| | | ELASLGKLQFGTGTQVVVTP >M64239|TRAJ25*01|Mus musculus_B10.D2-H2dm1|ORF|J-REGION|60421..60477|57 nt|3| | | |18 AA|18+0=18| | | RTKVSSVFGTWRRLLVKP >M64239|TRAJ26*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|60097..60156,t|60 nt|3| |1|+1|19 AA|19+0=19| | | NNYAQGLTFGLGTRVSVFP >M64239|TRAJ27*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|57913..57971|59 nt|2| | | |19 AA|19+0=19| | | NTNTGKLTFGDGTVLTVKP >X17177|TRAJ28*01|Mus musculus_Std:ddY|F|J-REGION|146..210|65 nt|2| | | |21 AA|21+0=21| | | LPGTGSNRLTFGKGTKFSLIP >M64239|TRAJ29*01|Mus musculus_B10.D2-H2dm1|ORF|J-REGION|56554..56613|60 nt|3| | | |19 AA|19+0=19| | | NSGSRELVLGREARLSMIE >M64239|TRAJ3*01|Mus musculus_B10.D2-H2dm1|P|J-REGION|82877..82942|66 nt|2| | | |21 AA|21+0=21| | | EFSYSSKLIFGAETKLRNPPY >M64239|TRAJ30*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|55477..55535|59 nt|2| | | |19 AA|19+0=19| | | DTNAYKVIFGKGTHLHVLP >M64239|TRAJ31*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|53507..53563|57 nt|3| | | |18 AA|18+0=18| | | NSNNRIFFGDGTQLVVKP >M16677|TRAJ31*02|Mus musculus|(F)|J-REGION|296..352,a|57 nt|3| |1| |18 AA|18+0=18| | | NNNNRIFFGDGTQLVVKP >X02858|TRAJ32*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|195..260|66 nt|3| | | |21 AA|21+0=21| | | NYGSSGNKLIFGIGTLLSVKP >BC030392|TRAJ32*02|Mus musculus|(F)|J-REGION|353..417,a|65 nt|2| |1| |21 AA|21+0=21| | | NYGGSGNKLIFGTGTLLSVKP >M64239|TRAJ33*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|50978..51034|57 nt|3| | | |18 AA|18+0=18| | | DSNYQLIWGSGTKLIIKP >X02862|TRAJ34*01|Mus musculus_BALB/c|F|J-REGION|38..95|58 nt|1| | | |19 AA|19+0=19| | | SSNTDKVVFGTGTRLQVSP >M20875|TRAJ34*02|Mus musculus_B10.S/9R|(F)|J-REGION|331..388,a|58 nt|1| |1| |19 AA|19+0=19| | | SSNTNKVVFGTGTRLQVLP >X03056|TRAJ35*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|768..832|65 nt|2| | | |21 AA|21+0=21| | | QTGFASALTFGSGTKVIPCLP >X02843|TRAJ35*02|Mus musculus_BALB/c|F|J-REGION|29..91|63 nt|3| | | |20 AA|20+0=20| | | RQGFASALTFGSGTKVIVLP >M64239|TRAJ36*01|Mus musculus_B10.D2-H2dm1|P|J-REGION|48023..48085|63 nt|3| | | |20 AA|20+0=20| | | NI*GKKKLVSGTRTRLTIIP >M64239|TRAJ37*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|47140..47199|60 nt|3| | | |19 AA|19+0=19| | | TGNTGKLIFGLGTTLQVQP >M64239|TRAJ38*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|46196..46257|62 nt|2| | | |20 AA|20+0=20| | | NVGDNSKLIWGLGTSLVVNP >M64239|TRAJ39*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|45584..45646|63 nt|3| | | |20 AA|20+0=20| | | NNNAGAKLTFGGGTRLTVRP >M64239|TRAJ4*01|Mus musculus_B10.D2-H2dm1|P|J-REGION|81880..81941|62 nt|3| | | |20 AA|20+0=20| | | LSGSFNKLTFGAGTRLLCAH >CT030634|TRAJ4*02|Mus musculus_C57BL/6J|F|J-REGION|182443..182505|63 nt|3| | ||20 AA|20+0=20| | | LSGSFNKLTFGAGTRLAVCP >X03058|TRAJ40*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|301..361|61 nt|1| | | |20 AA|20+0=20| | | VNTGNYKYVFGAGTRLKVIA >M64239|TRAJ41*01|Mus musculus_B10.D2-H2dm1|ORF|J-REGION|41898..41952|55 nt|2| | | |18 AA|18+0=18| | | VSNTSSMLAEAPHYWSHP >M64239|TRAJ42*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|41400..41463|64 nt|1| | | |21 AA|21+0=21| | | NSGGSNAKLTFGKGTKLSVKS >M16675|TRAJ42*02|Mus musculus_C57BL/6|(F)|J-REGION|370..373,a|61 nt|1| |1| |20 AA|20+0=20| | | SGGSNAKLAFGKGTKLSVKS >M64239|TRAJ43*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|40361..40417|57 nt|3| | | |18 AA|18+0=18| | | NNNNAPRFGAGTKLSVKP >X55823|TRAJ43*02|Mus musculus_DBA/2|(F)|J-REGION|207..263,a|57 nt|3| |1||18 AA|18+0=18| | | NNNNAPAFGAGTKLTVKP >M64239|TRAJ44*01|Mus musculus_B10.D2-H2dm1|ORF|J-REGION|39312..39372|61 nt|1| | | |20 AA|20+0=20| | | VTGSGGKLTLGAGTRLQVNL >X02859|TRAJ45*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|270..332|63 nt|3| | | |20 AA|20+0=20| | | NTEGADRLTFGKGTQLIIQP >M34206|TRAJ45*02|Mus musculus|(F)|J-REGION|279..333|55 nt|2| | ||18 AA|18+0=18|partial in 3'| | NTGGADRLTFGKGTQLII >M64239|TRAJ46*01|Mus musculus_B10.D2-H2dm1|P|J-REGION|37958..38019|62 nt|1| | | |20 AA|20+0=20| | | RRQQCRHAGFGDGDELGVST >M64239|TRAJ47*01|Mus musculus_B10.D2-H2dm1|ORF|J-REGION|37422..37478|57 nt|3| | | |18 AA|18+0=18| | | HYANKMICGLGTILRVRP >M64239|TRAJ48*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|35436..35496|61 nt|1| | | |20 AA|20+0=20| | | ANYGNEKITFGAGTKLTIKP >X03059|TRAJ49*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|215..276|62 nt|2| | | |20 AA|20+0=20| | | NTGYQNFYFGKGTSLTVIPS >M38105|TRAJ5*01|Mus musculus_B10.A|F|J-REGION|47..108|62 nt|2| | | |20 AA|20+0=20| | | GTQVVGQLTFGRGTRLQVYA >M64239|TRAJ50*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|33227..33289|63 nt|3| | | |20 AA|20+0=20| | | ASSSFSKLVFGQGTSLSVVP >M64239|TRAJ52*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|30956..31021|66 nt|3| | | |21 AA|21+0=21| | | NTGANTGKLTFGHGTILRVHP >M64239|TRAJ53*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|28282..28347|66 nt|3| | | |21 AA|21+0=21| | | NSGGSNYKLTFGKGTLLTVTP >M64239|TRAJ54*01|Mus musculus_B10.D2-H2dm1|P|J-REGION|27632..27685|54 nt|3| | | |17 AA|17+0=17| | | KRPGF*KLVFGQGTG*P >M64239|TRAJ56*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|24907..24969|63 nt|3| | | |20 AA|20+0=20| | | ATGGNNKLTFGQGTVLSVIP >M64239|TRAJ57*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|24150..24212|63 nt|3| | | |20 AA|20+0=20| | | NQGGSAKLIFGEGTKLTVSS >M64239|TRAJ58*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|22926..22988|63 nt|3| | | |20 AA|20+0=20| | | QQGTGSKLSFGKGAKLTVSP >M64239|TRAJ59*01|Mus musculus_B10.D2-H2dm1|P|J-REGION|21779..21840|62 nt|1| | | |20 AA|20+0=20| | | LLKREDKATFATGGYEAEED >M64239|TRAJ6*01|Mus musculus_B10.D2-H2dm1|F|J-REGION|78280..78341|62 nt|2| | | |20 AA|20+0=20| | | TSGGNYKPTFGKGTSLVVHP >M64239|TRAJ60*01|Mus musculus_B10.D2-H2dm1|P|J-REGION|21579..21632|54 nt|3| | | |17 AA|17+0=17| | | RSTKDLYFR*ELSSSSA >M64239|TRAJ61*01|Mus musculus_B10.D2-H2dm1|P|J-REGION|20652..20723|72 nt|2| | | |23 AA|23+0=23| | | VQN**EIGIFFFGAMTGRLMKLS >M64239|TRAJ7*01|Mus musculus_B10.D2-H2dm1|ORF|J-REGION|77064..77122|59 nt|2| | | |19 AA|19+0=19| | | DYSNNRLTLGKGTQVVVLP >X03761|TRAJ9*01|Mus musculus_BALB/c|F|J-REGION|77..134|58 nt|1| | | |19 AA|19+0=19| | | RNMGYKLTFGTGTSLLVDP >X02933|TRAJ9*02|Mus musculus_C57BL/Ka|(F)|J-REGION|295..352,a|58 nt|1| |1| |19 AA|19+0=19| | | ANMGYKLTFGTGTSLLVDP
Authors: Hugo Duvergey, Denis Moreno, Mansour Saljoqi, Véronique Giudicelli and Marie-Paule Lefranc
IMGT/GENE-DB scientific responsibles: Véronique Giudicelli (Veronique.Giudicelli@igh.cnrs.fr) and Marie-Paule Lefranc (Marie-Paule.Lefranc@igh.cnrs.fr)
Software material and data coming from IMGT server may be used for academic research only,
provided that it is referred to IMGT®, and cited as
"IMGT®, the international ImMunoGeneTics information system®
http://www.imgt.org
(founder and director: Marie-Paule Lefranc, Montpellier, France)."
References to cite:
Lefranc, M.-P. et al.,
Nucleic Acids Research, 27, 209-212 (1999)
Cover of NAR;
Ruiz, M. et al.,
Nucleic Acids Research, 28, 219-221 (2000);
Lefranc, M.-P.,
Nucleic Acids Research, 29, 207-209 (2001);
Lefranc, M.-P.,
Nucleic Acids Res., 31, 307-310 (2003);
Lefranc, M.-P. et al.,
In Silico Biol., 5, 0006 (2004) [Epub],
5, 45-60 (2005);
Lefranc, M.-P. et al.,
Nucleic Acids Res., 33, D593-D597 (2005)
Full text,
Lefranc, M.-P. et al.,
Nucleic Acids Research 2009 37(Database issue): D1006-D1012; doi:10.1093/nar/gkn838
Full text.
For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.
IMGT® Founder and Executive Director Emeritus:
Marie-Paule Lefranc
Marie-Paule.Lefranc@igh.cnrs.fr
IMGT® Director:
Sofia Kossida
Sofia.Kossida@igh.cnrs.fr
Bioinformatics manager:
Véronique Giudicelli
Veronique.Giudicelli@igh.cnrs.fr
Computer manager:
Patrice Duroux
Patrice.Duroux@igh.cnrs.fr
Webmaster:
Amélie Houles
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