Template Search

Search for structures similar to your sequence.

Pairwise alignments

Below you can view the templates Chothia-aligned to your sequence

PDB: 1vge

Heavy id: H

Light id: L

Matched sequence identity to query over full variable region : 100.0%

chothia CDRs - framework - match - mis-match

Heavy chain:

NumberingH1 H2 H3 H4 H5 H6 H7 H8 H9 H10 H11 H12 H13 H14 H15 H16 H17 H18 H19
QueryVKLLEQSGAEVKKPGASVK
TemplateVKLLEQSGAEVKKPGASVK
NumberingH20 H21 H22 H23 H24 H25 H26 H27 H28 H29 H30 H31 H32 H33 H34 H35 H36 H37 H38 H39
QueryVSCKASGYSFTSYGLHWVRQ
TemplateVSCKASGYSFTSYGLHWVRQ
NumberingH40 H41 H42 H43 H44 H45 H46 H47 H48 H49 H50 H51 H52 H52AH53 H54 H55 H56 H57 H58
QueryAPGQRLEWMGWISAGTGNTK
TemplateAPGQRLEWMGWISAGTGNTK
NumberingH59 H60 H61 H62 H63 H64 H65 H66 H67 H68 H69 H70 H71 H72 H73 H74 H75 H76 H77 H78
QueryYSQKFRGRVTFTRDTSATTA
TemplateYSQKFRGRVTFTRDTSATTA
NumberingH79 H80 H81 H82 H82AH82BH82CH83 H84 H85 H86 H87 H88 H89 H90 H91 H92 H93 H94 H95
QueryYMGLSSLRPEDTAVYYCARD
TemplateYMGLSSLRPEDTAVYYCARD
NumberingH96 H97 H98 H99 H100 H100AH100BH100CH100DH101 H102 H103 H104 H105 H106 H107 H108 H109 H110 H111
QueryPYGGGKSEFDYWGQGTLVTV
TemplatePYGGGKSEFDYWGQGTLVTV
NumberingH112 H113
QuerySS
TemplateSS

Light chain:

NumberingL1 L2 L3 L4 L5 L6 L7 L8 L9 L10 L11 L12 L13 L14 L15 L16 L17 L18 L19
QueryELVMTQSPSSLSASVGDRV
TemplateELVMTQSPSSLSASVGDRV
NumberingL20 L21 L22 L23 L24 L25 L26 L27 L28 L29 L30 L31 L32 L33 L34 L35 L36 L37 L38 L39
QueryNIACRASQGISSALAWYQQK
TemplateNIACRASQGISSALAWYQQK
NumberingL40 L41 L42 L43 L44 L45 L46 L47 L48 L49 L50 L51 L52 L53 L54 L55 L56 L57 L58 L59
QueryPGKAPRLLIYDASNLESGVP
TemplatePGKAPRLLIYDASNLESGVP
NumberingL60 L61 L62 L63 L64 L65 L66 L67 L68 L69 L70 L71 L72 L73 L74 L75 L76 L77 L78 L79
QuerySRFSGSGSGTDFTLTISSLQ
TemplateSRFSGSGSGTDFTLTISSLQ
NumberingL80 L81 L82 L83 L84 L85 L86 L87 L88 L89 L90 L91 L92 L93 L94 L95 L96 L97 L98 L99
QueryPEDFAIYYCQQFNSYPLTFG
TemplatePEDFAIYYCQQFNSYPLTFG
NumberingL100 L101 L102 L103 L104 L105 L106 L107 L108 L109 L110
QueryGGTKVEIKRTV
TemplateGGTKVEIKRTV

PDB: 5czx

Heavy id: H

Light id: L

Matched sequence identity to query over full variable region : 77.29%

chothia CDRs - framework - match - mis-match

Heavy chain:

NumberingH1 H2 H3 H4 H5 H6 H7 H8 H9 H10 H11 H12 H13 H14 H15 H16 H17 H18 H19
QueryVKLLEQSGAEVKKPGASVK
TemplateQVQLVQSGAEVKKPGSSVK
NumberingH20 H21 H22 H23 H24 H25 H26 H27 H28 H29 H30 H31 H32 H33 H34 H35 H36 H37 H38 H39
QueryVSCKASGYSFTSYGLHWVRQ
TemplateVSCKASGGTF