Structure Viewer: 6i2g

>   Structure details

alfa-Tag Binding Nanobody (Nbalfa) Bound to alfa-Tag Peptide.

PDB6i2g
SpeciesVICUGNA PACOS
MethodX-RAY DIFFRACTION
Resolution1.5Å
Number of Fvs1
In complexTrue
Light chain typeunknown
Has constant regionFalse
>   Structure visualisation
Please note the WebGL plugin needs to be enabled to use PV Viewer.

Display options:














>   Fv information

This PDB has 1 Fv(s).

>   A/-
Fv Details
Heavy chainA
Light chain
Heavy subgroupunknown
Light subgroupunknown
SpeciesVICUGNA PACOS
In complex?True
scFv?False
Has constant domain?False

Numbered Sequences (chothia)

Heavy chain

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 31A 31B 31C 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 82A 82B 82C 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 100A 100B 100C 101 102 103 104 105 106 107 108 109 110 111 112 113
E V Q L Q E S G G G L V Q P G G S L R L S C T A S G V T I S A L N A M A M G W Y R Q A P G E R R V M V A A V S E R G N A M Y R E S V Q G R F T V T R D F T N K M V S L Q M D N L K P E D T A V Y Y C H V L E D R V D S F H D Y W G Q G T Q V T V S S

Antigen Details
Antigen chainsB
Antigen typepeptide
Antigen namen7p-ser-arg-leu-glu-glu-glu-leu-arg-arg-arg-leu-thr-glu-lpd
Antigen speciesSYNTHETIC CONSTRUCT
Antigen sequencePSRLEEELRRRLTEP

CDR Sequences (chothia definition)
CDRH1GVTISALNAM
CDRH2SERGN
CDRH3LEDRVDSFHDY

>   Downloads

Additional links and files for download: see help for more details.

Chothia-numbered structure Download
IMGT-numbered structure Download
Non-annotated structure from the PDB Download
Summary file for this antibody Download

Schneider, C., Raybould, M.I.J., Deane, C.M. (2022) SAbDab in the Age of Biotherapeutics: Updates including SAbDab-Nano, the Nanobody Structure Tracker. Nucleic Acids Res. 50(D1):D1368-D1372 [link]

SAbDab paper: Dunbar, J., Krawczyk, K. et al (2014). Nucleic Acids Res. 42. D1140-D1146 [link]

Thera-SAbDab paper: Raybould, M.I.J., Marks, C. et al (2019). Nucleic Acids Res. gkz827 [link]

Our privacy policy