TCR Details:

Item	Info
VB chain	B
VA chain	A
VB IMGT details	TRBV13/TRBJ2
VA IMGT details	TRAV4/TRAJ9
Species	mouse

Antigen Details:

Item	Info
Antigen Chain	C
Antigen Type	Hapten
Antigen Organism	MUS MUSCULUS
Antigen name	(2S)-2-(heptadecanoyloxy)-3-{[(10S)-10-methyloctadecanoyl]oxy}propyl alpha-D-glucopyranosiduronic acid
Antigen residue	SRV

MHC details:

Item	Info
MHC Chain	C | D
MHC Type	CD1
MHC Species	mouse
MHC IMGT details	CD1D1*01

Numbered sequence

Chain type	Chain ID	FASTA/Annotation file	IMGT numbered sequence (Framework/CDR)
VB	B	FASTA file	B1 B2 B3 B4 B5 B6 B7 B8 E A A V T Q S P B9 B10 B11 B12 B13 B14 B15 B16 R N K V A V T G B17 B18 B19 B20 B21 B22 B23 B24 G K V T L S C N B25 B26 B27 B28 B29 B37 B38 B39 Q T N N H N N M B40 B41 B42 B43 B44 B45 B46 B47 Y W Y R Q D T G B48 B49 B50 B51 B52 B53 B54 B55 H G L R L I H Y B56 B57 B58 B63 B64 B65 B66 B67 S Y G A G S T E B68 B69 B70 B71 B72 B74 B75 B76 K G D I P D G Y B77 B78 B79 B80 B81 B83 B84 B85 K A S R P S Q E B86 B87 B88 B89 B90 B91 B92 B93 N F S L I L E L B94 B95 B96 B97 B98 B99 B100 B101 A T P S Q T S V B102 B103 B104 B105 B106 B107 B108 B109 Y F C A S G D P B110 B111 B112 B113 B114 B115 B116 B117 Q G V S Y E Q Y B118 B119 B120 B121 B122 B123 B124 B125 F G P G T R L T B126 B127 V L
VA	A	FASTA file	A1 A2 A3 A4 A5 A6 A7 A8 G M P V E Q N P A9 A10 A11 A12 A13 A14 A15 A16 P A L S L Y E G A17 A18 A19 A20 A21 A22 A23 A24 A D S G L R C N A25 A26 A27 A28 A29 A37 A38 A39 F S T T M K S V A40 A41 A42 A43 A44 A45 A46 A47 Q W F Q Q N H R A48 A49 A50 A51 A52 A53 A54 A55 G R L I T L F Y A56 A57 A58 A64 A65 A66 A67 A68 L A Q G T K E N A74 A75 A76 A77 A78 A79 A80 A81 G R L K S T F N A82 A83 A84 A85 A86 A87 A88 A89 S K E R Y S T L A90 A91 A92 A93 A94 A95 A96 A97 H I K D A Q L E A98 A99 A100 A101 A102 A103 A104 A105 D S G T Y F C A A106 A107 A108 A109 A113 A114 A115 A116 A V N M G Y K L A117 A118 A119 A120 A121 A122 A123 A124 T F G T G T S L A125 A126 A127 A128 L V D P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASGDPQGVSYEQY	None	13
CDRB2	SYGAGS	None	6
CDRB1	NNHNN	None	5
CDRA3	AAVNMGYKLT	None	10
CDRA2	LAQGT	None	5
CDRA1	TTMKS	None	5

Orientation and docking angles:

Angle	Value
BC2	101.09°
BC1	73.12°
BA	-55.20°
AC2	81.96°
AC1	121.34°
dc	16.03Å
Docking angle	21.17°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
4jfh_ED	100.12°	72.76°	-55.04°	82.61°	121.25°	15.95Å	1.2
6mra_BA	100.44°	73.77°	-54.63°	82.11°	122.00°	15.88Å	1.3
7nmg_ED	101.49°	74.29°	-55.01°	81.27°	120.91°	16.16Å	1.5
3vxs_ED	100.98°	72.92°	-55.61°	83.05°	120.18°	15.92Å	1.7
7nmf_ED	102.41°	74.13°	-54.73°	81.83°	121.62°	16.17Å	1.8

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
3mnw_BA	107.15°	71.13°	-53.34°	82.80°	121.51°	16.47Å	6.7
3mnz_BA	108.41°	71.26°	-53.27°	82.05°	121.70°	16.38Å	7.8
3mnv_DC	108.94°	70.99°	-55.77°	82.75°	119.97°	16.56Å	8.3
1cfq_BA	106.86°	67.47°	-56.63°	80.83°	119.58°	16.37Å	8.5
4ydl_HL	108.56°	70.76°	-54.72°	85.96°	123.49°	15.98Å	9.1