TCR Details:

Item	Info
VB chain	D
VA chain	C
VB IMGT details	TRBV13/TRBJ2
VA IMGT details	TRAV1/TRAJ33
Species	mouse

Antigen Details:

Item	Info
Antigen Chain	A
Antigen Type	Hapten
Antigen Organism	MUS MUSCULUS
Antigen name	1-DEOXY-1-({2,6-DIOXO-5-[(E)-(2-OXOPROPYLIDENE)AMINO]-1,2,3,6-TETRAHYDROPYRIMIDIN-4-YL}AMINO)-D-RIBITOL
Antigen residue	2LJ

MHC details:

Item	Info
MHC Chain	A | B
MHC Type	MR1
MHC Species	mouse
MHC IMGT details	MR1*01

Numbered sequence

Chain type	Chain ID	FASTA/Annotation file	IMGT numbered sequence (Framework/CDR)
VB	D	FASTA file	B1 B2 B3 B4 B5 B6 B7 B8 E A A V T Q S P B9 B10 B11 B12 B13 B14 B15 B16 R N K V A V T G B17 B18 B19 B20 B21 B22 B23 B24 G K V T L S C N B25 B26 B27 B28 B29 B37 B38 B39 Q T N N H N N M B40 B41 B42 B43 B44 B45 B46 B47 Y W Y R Q D T G B48 B49 B50 B51 B52 B53 B54 B55 H G L R L I H Y B56 B57 B58 B63 B64 B65 B66 B67 S Y G A G S T E B68 B69 B70 B71 B72 B74 B75 B76 K G D I P D G Y B77 B78 B79 B80 B81 B83 B84 B85 K A S R P S Q E B86 B87 B88 B89 B90 B91 B92 B93 N F S L I L E L B94 B95 B96 B97 B98 B99 B100 B101 A T P S Q T S V B102 B103 B104 B105 B106 B107 B108 B109 Y F C A S G D N B110 B111 B112 B113 B114 B115 B116 B117 W G G A E T L Y B118 B119 B120 B121 B122 B123 B124 B125 F G S G T R L T B126 B127 V L
VA	C	FASTA file	A1 A2 A3 A4 A5 A6 A8 A9 G Q G V E Q P A A10 A11 A12 A13 A14 A15 A16 A17 K L M S V E G T A18 A19 A20 A21 A22 A23 A24 A25 F A R V N C T Y A26 A27 A28 A29 A36 A37 A38 A39 S T S G F N G L A40 A41 A42 A43 A44 A45 A46 A47 S W Y Q Q R E G A48 A49 A50 A51 A52 A53 A54 A55 Q A P V F L S Y A56 A57 A58 A63 A64 A65 A66 A67 V V L D G L K D A68 A74 A75 A76 A77 A78 A79 A80 S G H F S T F L A81 A82 A83 A84 A85 A86 A87 A88 S R S N G Y S Y A89 A90 A91 A92 A93 A94 A95 A96 L L L T E L Q I A97 A98 A99 A100 A101 A102 A103 A104 K D S A S Y L C A105 A106 A107 A108 A109 A113 A114 A115 A V R D S N Y Q A116 A117 A118 A119 A120 A121 A122 A123 L I W G S G T K A124 A125 A126 A127 A128 L I I K P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASGDNWGGAETLY	None	13
CDRB2	SYGAGS	None	6
CDRB1	NNHNN	None	5
CDRA3	AVRDSNYQLI	None	10
CDRA2	VVLDGL	None	6
CDRA1	TSGFNG	A1-6-F	6

Orientation and docking angles:

Angle	Value
BC2	105.58°
BC1	71.75°
BA	-65.27°
AC2	80.76°
AC1	124.60°
dc	16.54Å
Docking angle	57.19°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
8i5d_BA	105.56°	71.73°	-65.25°	81.36°	126.32°	16.74Å	1.8
4elk_BA	105.77°	71.69°	-67.56°	81.33°	124.76°	16.38Å	2.4
8vz9_DC	106.18°	72.14°	-63.32°	81.74°	125.40°	16.62Å	2.4
2nw2_BA	105.62°	72.42°	-66.59°	78.59°	124.81°	16.89Å	2.7
4lcc_BA	104.44°	73.52°	-65.60°	79.10°	124.33°	16.60Å	2.7

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
3s96_AB	107.61°	73.57°	-66.51°	82.70°	120.78°	16.43Å	5.2
4dcq_BA	108.30°	73.42°	-64.76°	82.94°	120.98°	16.23Å	5.3
1nmc_HL	110.09°	71.80°	-64.06°	80.19°	120.88°	16.16Å	6.0
5te6_HL	110.27°	71.02°	-62.37°	82.91°	121.25°	16.49Å	6.8
1ghf_HL	110.63°	71.68°	-61.52°	81.98°	122.12°	16.05Å	6.9