Structure summary for 1l0y

Detailed entry information.

Details for 1l0y

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Structure information

T Cell Receptor Beta Chain complexed with Superantigen Spea Soaked with Zinc

Item	Info
PDB	1l0y
Organism	MUS MUSCULUS
Method	X-RAY DIFFRACTION
Resolution	2.5Å
Number of TCRs	2

Paired chains information

This PDB has 2 TCR(s).

A / NA

TCR Details:

Item	Info
VB chain	A
VB IMGT details	TRBV13/TRBJ2
Species	mouse

Numbered sequence

Chain type

Chain ID

FASTA/Annotation file

IMGT numbered sequence (Framework/CDR)

VB

A

B3	B4	B5	B6	B7	B8	B9	B10
A	V	T	Q	S	P	R	N
B11	B12	B13	B14	B15	B16	B17	B18
K	V	A	V	T	G	G	K
B19	B20	B21	B22	B23	B24	B25	B26
V	T	L	S	C	Q	Q	T
B27	B28	B29	B37	B38	B39	B40	B41
N	N	H	N	N	M	Y	W
B42	B43	B44	B45	B46	B47	B48	B49
Y	R	Q	D	T	G	H	G
B50	B51	B52	B53	B54	B55	B56	B57
L	R	L	I	H	Y	S	Y
B58	B63	B64	B65	B66	B67	B68	B69
G	A	G	S	T	E	K	G
B70	B71	B72	B74	B75	B76	B77	B78
D	I	P	D	G	Y	K	A
B79	B80	B81	B83	B84	B85	B86	B87
S	R	P	S	Q	E	Q	F
B88	B89	B90	B91	B92	B93	B94	B95
S	L	I	L	E	L	A	T
B96	B97	B98	B99	B100	B101	B102	B103
P	S	Q	T	S	V	Y	F
B104	B105	B106	B107	B108	B109	B110	B111
C	A	S	G	G	G	R	G
B112	B113	B114	B115	B116	B117	B118	B119
S	Y	A	E	Q	F	F	G
B120	B121	B122	B123	B124	B125	B126	B127
P	G	T	R	L	T	V	L

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASGGGRGSYAEQF	None	13
CDRB2	SYGAGS	None	6
CDRB1	NNHNN	None	5

C / NA

TCR Details:

Item	Info
VB chain	C
VB IMGT details	TRBV13/TRBJ2
Species	mouse

Numbered sequence

Chain type

Chain ID

FASTA/Annotation file

IMGT numbered sequence (Framework/CDR)

VB

C

B3	B4	B5	B6	B7	B8	B9	B10
A	V	T	Q	S	P	R	N
B11	B12	B13	B14	B15	B16	B17	B18
K	V	A	V	T	G	G	K
B19	B20	B21	B22	B23	B24	B25	B26
V	T	L	S	C	Q	Q	T
B27	B28	B29	B37	B38	B39	B40	B41
N	N	H	N	N	M	Y	W
B42	B43	B44	B45	B46	B47	B48	B49
Y	R	Q	D	T	G	H	G
B50	B51	B52	B53	B54	B55	B56	B57
L	R	L	I	H	Y	S	Y
B58	B63	B64	B65	B66	B67	B68	B69
G	A	G	S	T	E	K	G
B70	B71	B72	B74	B75	B76	B77	B78
D	I	P	D	G	Y	K	A
B79	B80	B81	B83	B84	B85	B86	B87
S	R	P	S	Q	E	Q	F
B88	B89	B90	B91	B92	B93	B94	B95
S	L	I	L	E	L	A	T
B96	B97	B98	B99	B100	B101	B102	B103
P	S	Q	T	S	V	Y	F
B104	B105	B106	B107	B108	B109	B110	B111
C	A	S	G	G	G	R	G
B112	B113	B114	B115	B116	B117	B118	B119
S	Y	A	E	Q	F	F	G
B120	B121	B122	B123	B124	B125	B126	B127
P	G	T	R	L	T	V	L

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASGGGRGSYAEQF	None	13
CDRB2	SYGAGS	None	6
CDRB1	NNHNN	None	5

Available downloads

Additional links and files for download: see help for more details.

Item	Link
IMGT-numbered structure	Link
Non-annotated structure from the PDB	Link
Summary file for this TCR	Link
Link in the PDB	Link