TCR Details:

Item	Info
VB chain	D
VA chain	C
VB IMGT details	TRBV29/TRBJ2
VA IMGT details	TRAV11/TRAJ18
Species	mouse

Antigen Details:

Item	Info
Antigen Chain	A
Antigen Type	Carbohydrate
Antigen Organism	MUS MUSCULUS
Antigen name	N-{(1S,2R,3S)-1-[(ALPHA-D-GALACTOPYRANOSYLOXY)METHYL]-2,3-DIHYDROXYHEPTADECYL}HEXACOSANAMIDE
Antigen residue	AGH

MHC details:

Item	Info
MHC Chain	A | B
MHC Type	CD1
MHC Species	mouse
MHC IMGT details	CD1D1*01

Numbered sequence

Chain type	Chain ID	FASTA/Annotation file	IMGT numbered sequence (Framework/CDR)
VB	D	FASTA file	B1 B2 B3 B4 B5 B6 B7 B8 D M K V T Q M P B9 B10 B11 B12 B13 B14 B15 B16 R Y L I K R M G B17 B18 B19 B20 B21 B22 B23 B24 E N V L L E C G B25 B26 B27 B28 B29 B37 B38 B39 Q D M S H E T M B40 B41 B42 B43 B44 B45 B46 B47 Y W Y R Q D P G B48 B49 B50 B51 B52 B53 B54 B55 L G L Q L I Y I B56 B57 B58 B63 B64 B65 B66 B67 S Y D V D S N S B68 B69 B70 B71 B72 B74 B75 B76 E G D I P K G Y B77 B78 B79 B80 B81 B83 B84 B85 R V S R K K R E B86 B87 B88 B89 B90 B91 B92 B93 H F S L I L D S B94 B95 B96 B97 B98 B99 B100 B101 A K T N Q T S V B102 B103 B104 B105 B106 B107 B108 B109 Y F C A S S S T B110 B113 B114 B115 B116 B117 B118 B119 G L D T Q Y F G B120 B121 B122 B123 B124 B125 B126 B127 P G T R L L V L
VA	C	FASTA file	A2 A3 A4 A5 A6 A7 A8 A9 T Q V E Q S P Q A10 A11 A12 A13 A14 A15 A16 A17 S L V V R Q G E A18 A19 A20 A21 A22 A23 A24 A25 N S V L Q C N Y A26 A27 A28 A29 A36 A37 A38 A39 S V T P D N H L A40 A41 A42 A43 A44 A45 A46 A47 R W F K Q D T G A48 A49 A50 A51 A52 A53 A54 A55 K G L V S L T V A56 A57 A58 A59 A63 A64 A65 A66 L V D Q K D K T A67 A68 A74 A75 A76 A77 A78 A79 S N G R Y S A T A80 A81 A82 A83 A84 A85 A86 A87 L D K D A K H S A88 A89 A90 A91 A92 A93 A94 A95 T L H I T A T L A96 A97 A98 A99 A100 A101 A102 A103 L D D T A T Y I A104 A105 A106 A107 A108 A109 A110 A111 C V V G D R G S A112 A113 A114 A115 A116 A117 A118 A119 A L G R L H F G A120 A121 A122 A123 A124 A125 A126 A127 A G T Q L I V I A128 P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASSSTGLDTQY	None	11
CDRB2	SYDVDS	None	6
CDRB1	MSHET	None	5
CDRA3	VVGDRGSALGRLH	None	13
CDRA2	LVDQKDK	A2-7-C	7
CDRA1	VTPDNH	None	6

Orientation and docking angles:

Angle	Value
BC2	102.78°
BC1	70.06°
BA	-64.14°
AC2	82.60°
AC1	124.67°
dc	17.02Å
Docking angle	29.42°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
7zt8_ED	102.98°	70.77°	-62.30°	81.33°	125.87°	16.92Å	2.6
3tyf_DC	102.08°	72.13°	-63.97°	82.92°	126.43°	16.81Å	2.8
6ovn_BA	102.95°	70.15°	-62.53°	80.41°	124.25°	16.00Å	2.9
6ovo_BA	103.01°	72.72°	-64.60°	82.04°	125.37°	16.52Å	2.9
3skn_HG	101.86°	71.18°	-62.76°	80.79°	123.11°	17.06Å	3.1

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
4dcq_BA	108.30°	73.42°	-64.76°	82.94°	120.98°	16.23Å	7.5
3s96_AB	107.61°	73.57°	-66.51°	82.70°	120.78°	16.43Å	7.5
5te6_HL	110.27°	71.02°	-62.37°	82.91°	121.25°	16.49Å	8.5
1nmc_HL	110.09°	71.80°	-64.06°	80.19°	120.88°	16.16Å	8.8
1ghf_HL	110.63°	71.68°	-61.52°	81.98°	122.12°	16.05Å	8.9