TCR Details:

Item	Info
VB chain	E
VA chain	D
VB IMGT details	TRBV6/TRBJ2
VA IMGT details	TRAV1/TRAJ33
Species	human

Antigen Details:

Item	Info
Antigen Chain	C
Antigen Type	Hapten
Antigen Organism	HOMO SAPIENS
Antigen name	1,2-dideoxy-1-({2,6-dioxo-5-[(E)-(2-oxopropylidene)amino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-erythro-pentitol
Antigen residue	Q84

MHC details:

Item	Info
MHC Chain	C | F
MHC Type	MR1
MHC Species	human
MHC IMGT details	MR1*01

Numbered sequence

Chain type	Chain ID	FASTA/Annotation file	IMGT numbered sequence (Framework/CDR)
VB	E	FASTA file	B1 B2 B3 B4 B5 B6 B7 B8 N A G V T Q T P B9 B10 B11 B12 B13 B14 B15 B16 K F Q V L K T G B17 B18 B19 B20 B21 B22 B23 B24 Q S M T L Q C A B25 B26 B27 B28 B29 B37 B38 B39 Q D M N H N S M B40 B41 B42 B43 B44 B45 B46 B47 Y W Y R Q D P G B48 B49 B50 B51 B52 B53 B54 B55 M G L R L I Y Y B56 B57 B58 B63 B64 B65 B66 B67 S A S E G T T D B68 B69 B70 B71 B72 B74 B75 B76 K G E V P N G Y B77 B78 B79 B80 B81 B83 B84 B85 N V S R L N K R B86 B87 B88 B89 B90 B91 B92 B93 E F S L R L E S B94 B95 B96 B97 B98 B99 B100 B101 A A P S Q T S V B102 B103 B104 B105 B106 B107 B108 B109 Y F C A S S V W B110 B111 B112A B112 B113 B114 B115 B116 T G E G S G E L B117 B118 B119 B120 B121 B122 B123 B124 F F G E G S R L B125 B126 B127 T V L
VA	D	FASTA file	A1 A2 A3 A4 A5 A6 A8 A9 G Q N I D Q P T A10 A11 A12 A13 A14 A15 A16 A17 E M T A T E G A A18 A19 A20 A21 A22 A23 A24 A25 I V Q I N C T Y A26 A27 A28 A29 A36 A37 A38 A39 Q T S G F N G L A40 A41 A42 A43 A44 A45 A46 A47 F W Y Q Q H A G A48 A49 A50 A51 A52 A53 A54 A55 E A P T F L S Y A56 A57 A58 A63 A64 A65 A66 A67 N V L D G L E E A68 A74 A75 A76 A77 A78 A79 A80 K G R F S S F L A81 A82 A83 A84 A85 A86 A87 A88 S R S K G Y S Y A89 A90 A91 A92 A93 A94 A95 A96 L L L K E L Q M A97 A98 A99 A100 A101 A102 A103 A104 K D S A S Y L C A105 A106 A107 A108 A109 A113 A114 A115 A V K D S N Y Q A116 A117 A118 A119 A120 A121 A122 A123 L I W G A G T K A124 A125 A126 A127 A128 L I I K P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASSVWTGEGSGELF	None	14
CDRB2	SASEGT	None	6
CDRB1	MNHNS	None	5
CDRA3	AVKDSNYQLI	None	10
CDRA2	NVLDGL	None	6
CDRA1	TSGFNG	A1-6-F	6

Orientation and docking angles:

Angle	Value
BC2	103.73°
BC1	73.19°
BA	-60.91°
AC2	80.68°
AC1	123.91°
dc	16.79Å
Docking angle	58.41°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
5u17_GB	103.91°	73.21°	-60.92°	80.58°	123.99°	16.73Å	0.2
4lcw_HG	103.72°	72.86°	-60.75°	80.64°	123.76°	16.70Å	0.4
6pul_ED	103.91°	73.05°	-61.18°	80.49°	123.92°	16.74Å	0.4
6pui_ED	104.03°	73.34°	-61.07°	80.52°	123.97°	16.69Å	0.4
6pud_ED	103.98°	73.06°	-61.14°	80.62°	123.93°	16.69Å	0.4

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
4dcq_BA	108.30°	73.42°	-64.76°	82.94°	120.98°	16.23Å	7.1
1nma_HL	109.88°	72.48°	-61.03°	81.63°	120.29°	16.40Å	7.2
1ghf_HL	110.63°	71.68°	-61.52°	81.98°	122.12°	16.05Å	7.5
5te7_HL	110.03°	71.72°	-60.97°	83.32°	120.63°	16.37Å	7.7
3s96_AB	107.61°	73.57°	-66.51°	82.70°	120.78°	16.43Å	7.8

TCR Details:

Item	Info
VB chain	H
VA chain	G
VB IMGT details	TRBV6/TRBJ2
VA IMGT details	TRAV1/TRAJ33
Species	human

Antigen Details:

Item	Info
Antigen Chain	A
Antigen Type	Hapten
Antigen Organism	HOMO SAPIENS
Antigen name	1,2-dideoxy-1-({2,6-dioxo-5-[(E)-(2-oxopropylidene)amino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-erythro-pentitol
Antigen residue	Q84

MHC details:

Item	Info
MHC Chain	A | B
MHC Type	MR1
MHC Species	human
MHC IMGT details	MR1*01

Numbered sequence

Chain type	Chain ID	FASTA/Annotation file	IMGT numbered sequence (Framework/CDR)
VB	H	FASTA file	B1 B2 B3 B4 B5 B6 B7 B8 N A G V T Q T P B9 B10 B11 B12 B13 B14 B15 B16 K F Q V L K T G B17 B18 B19 B20 B21 B22 B23 B24 Q S M T L Q C A B25 B26 B27 B28 B29 B37 B38 B39 Q D M N H N S M B40 B41 B42 B43 B44 B45 B46 B47 Y W Y R Q D P G B48 B49 B50 B51 B52 B53 B54 B55 M G L R L I Y Y B56 B57 B58 B63 B64 B65 B66 B67 S A S E G T T D B68 B69 B70 B71 B72 B74 B75 B76 K G E V P N G Y B77 B78 B79 B80 B81 B83 B84 B85 N V S R L N K R B86 B87 B88 B89 B90 B91 B92 B93 E F S L R L E S B94 B95 B96 B97 B98 B99 B100 B101 A A P S Q T S V B102 B103 B104 B105 B106 B107 B108 B109 Y F C A S S V W B110 B111 B112A B112 B113 B114 B115 B116 T G E G S G E L B117 B118 B119 B120 B121 B122 B123 B124 F F G E G S R L B125 B126 B127 T V L
VA	G	FASTA file	A1 A2 A3 A4 A5 A6 A8 A9 G Q N I D Q P T A10 A11 A12 A13 A14 A15 A16 A17 E M T A T E G A A18 A19 A20 A21 A22 A23 A24 A25 I V Q I N C T Y A26 A27 A28 A29 A36 A37 A38 A39 Q T S G F N G L A40 A41 A42 A43 A44 A45 A46 A47 F W Y Q Q H A G A48 A49 A50 A51 A52 A53 A54 A55 E A P T F L S Y A56 A57 A58 A63 A64 A65 A66 A67 N V L D G L E E A68 A74 A75 A76 A77 A78 A79 A80 K G R F S S F L A81 A82 A83 A84 A85 A86 A87 A88 S R S K G Y S Y A89 A90 A91 A92 A93 A94 A95 A96 L L L K E L Q M A97 A98 A99 A100 A101 A102 A103 A104 K D S A S Y L C A105 A106 A107 A108 A109 A113 A114 A115 A V K D S N Y Q A116 A117 A118 A119 A120 A121 A122 A123 L I W G A G T K A124 A125 A126 A127 A128 L I I K P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASSVWTGEGSGELF	None	14
CDRB2	SASEGT	None	6
CDRB1	MNHNS	None	5
CDRA3	AVKDSNYQLI	None	10
CDRA2	NVLDGL	None	6
CDRA1	TSGFNG	A1-6-F	6

Orientation and docking angles:

Angle	Value
BC2	104.01°
BC1	73.74°
BA	-64.41°
AC2	79.00°
AC1	123.07°
dc	16.55Å
Docking angle	61.58°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
6puj_GB	103.85°	73.94°	-64.58°	78.91°	122.95°	16.51Å	0.3
6pui_GB	104.00°	73.85°	-64.51°	78.70°	123.03°	16.48Å	0.3
6pul_GB	104.34°	73.84°	-64.63°	78.92°	122.98°	16.54Å	0.4
5u17_ED	104.39°	73.83°	-64.46°	78.84°	123.15°	16.51Å	0.4
6pue_HG	103.85°	73.74°	-64.56°	79.33°	123.13°	16.52Å	0.4

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
3s96_AB	107.61°	73.57°	-66.51°	82.70°	120.78°	16.43Å	6.0
4dcq_BA	108.30°	73.42°	-64.76°	82.94°	120.98°	16.23Å	6.2
5jue_HL	106.42°	70.98°	-68.16°	76.41°	119.66°	16.06Å	6.8
1nmc_HL	110.09°	71.80°	-64.06°	80.19°	120.88°	16.16Å	6.9
4yfl_FI	106.92°	71.36°	-64.48°	73.60°	120.95°	15.85Å	6.9