TCR Details:

Item	Info
VB chain	F
VA chain	E
VB IMGT details	TRBV6/TRBJ1
VA IMGT details	TRAV12/TRAJ27
Species	human

Antigen Details:

Item	Info
Antigen Chain	C
Antigen Type	Hapten
Antigen Organism	HOMO SAPIENS
Antigen name	(4R,7R,18Z)-4,7-dihydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphaheptacos-18-en-1-aminium 4-oxide
Antigen residue	42H

MHC details:

Item	Info
MHC Chain	C | D
MHC Type	CD1
MHC Species	human
MHC IMGT details	CD1A*01

Numbered sequence

Chain type	Chain ID	FASTA/Annotation file	IMGT numbered sequence (Framework/CDR)
VB	F	FASTA file	B1 B2 B3 B4 B5 B6 B7 B8 N A G V T Q T P B9 B10 B11 B12 B13 B14 B15 B16 K F R V L K T G B17 B18 B19 B20 B21 B22 B23 B24 Q S M T L L C A B25 B26 B27 B28 B29 B37 B38 B39 Q D M N H E Y M B40 B41 B42 B43 B44 B45 B46 B47 Y W Y R Q D P G B48 B49 B50 B51 B52 B53 B54 B55 M G L R L I H Y B56 B57 B58 B63 B64 B65 B66 B67 S V G E G T T A B68 B69 B70 B71 B72 B74 B75 B76 K G E V P D G Y B77 B78 B79 B80 B81 B83 B84 B85 N V S R L K K Q B86 B87 B88 B89 B90 B91 B92 B93 N F L L G L E S B94 B95 B96 B97 B98 B99 B100 B101 A A P S Q T S V B102 B103 B104 B105 B106 B107 B108 B109 Y F C A S R Y F B110 B111 B112A B112 B113 B114 B115 B116 L P T Q G M G A B117 B118 B119 B120 B121 B122 B123 B124 F F G Q G T R L B125 B126 B127 T V V
VA	E	FASTA file	A1 A2 A3 A4 A5 A6 A7 A8 Q K E V E Q D P A9 A10 A11 A12 A13 A14 A15 A16 G P L S V P E G A17 A18 A19 A20 A21 A22 A23 A24 A I V S L N C T A25 A26 A27 A28 A29 A36 A37 A38 Y S N S A F Q Y A39 A40 A41 A42 A43 A44 A45 A46 F M W Y R Q Y S A47 A48 A49 A50 A51 A52 A53 A54 R K G P E L L M A55 A56 A57 A58 A63 A64 A65 A66 Y T Y S S G N K A67 A68 A74 A75 A76 A77 A78 A79 E D G R F T A Q A80 A81 A82 A83 A84 A85 A86 A87 V D K S S K Y I A88 A89 A90 A91 A92 A93 A94 A95 S L F I R D S Q A96 A97 A98 A99 A100 A101 A102 A103 P S D S A T Y L A104 A105 A106 A107 A108 A109 A110 A111 C A M S T S L P A112 A113 A114 A115 A116 A117 A118 A119 N A G K S T F G A120 A121 A122 A123 A124 A125 A126 A127 D G T T L T V K A128 P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASRYFLPTQGMGAF	None	14
CDRB2	SVGEGT	None	6
CDRB1	MNHEY	None	5
CDRA3	AMSTSLPNAGKST	None	13
CDRA2	TYSSGN	A2-6-B	6
CDRA1	NSAFQY	None	6

Orientation and docking angles:

Angle	Value
BC2	105.64°
BC1	72.65°
BA	-62.07°
AC2	76.83°
AC1	123.03°
dc	16.49Å
Docking angle	80.83°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
4x6d_HG	106.02°	72.33°	-61.93°	75.96°	122.76°	16.56Å	1.0
8i5c_TS	106.08°	73.18°	-62.04°	77.86°	123.65°	16.53Å	1.4
8i5c_JI	105.80°	73.04°	-62.22°	78.09°	123.79°	16.56Å	1.5
8i5c_ON	106.07°	73.01°	-62.27°	78.18°	123.80°	16.59Å	1.7
8i5c_ED	106.34°	73.41°	-61.79°	78.05°	123.49°	16.53Å	1.7

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
4yfl_FI	106.92°	71.36°	-64.48°	73.60°	120.95°	15.85Å	4.9
1nmc_HL	110.09°	71.80°	-64.06°	80.19°	120.88°	16.16Å	6.4
2vxu_IM	110.96°	71.68°	-62.78°	78.60°	119.89°	16.17Å	6.5
1nma_HL	109.88°	72.48°	-61.03°	81.63°	120.29°	16.40Å	7.0
4uil_HL	109.73°	69.62°	-65.41°	77.88°	119.52°	16.24Å	7.1

TCR Details:

Item	Info
VB chain	H
VA chain	G
VB IMGT details	TRBV6/TRBJ1
VA IMGT details	TRAV12/TRAJ27
Species	human

Antigen Details:

Item	Info
Antigen Chain	A
Antigen Type	Hapten
Antigen Organism	HOMO SAPIENS
Antigen name	(4R,7R,18Z)-4,7-dihydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphaheptacos-18-en-1-aminium 4-oxide
Antigen residue	42H

MHC details:

Item	Info
MHC Chain	A | NA
MHC Type	CD1
MHC Species	human
MHC IMGT details	CD1A*01

Numbered sequence

Chain type	Chain ID	FASTA/Annotation file	IMGT numbered sequence (Framework/CDR)
VB	H	FASTA file	B1 B2 B3 B4 B5 B6 B7 B8 N A G V T Q T P B9 B10 B11 B12 B13 B14 B15 B16 K F R V L K T G B17 B18 B19 B20 B21 B22 B23 B24 Q S M T L L C A B25 B26 B27 B28 B29 B37 B38 B39 Q D M N H E Y M B40 B41 B42 B43 B44 B45 B46 B47 Y W Y R Q D P G B48 B49 B50 B51 B52 B53 B54 B55 M G L R L I H Y B56 B57 B58 B63 B64 B65 B66 B67 S V G E G T T A B68 B69 B70 B71 B72 B74 B75 B76 K G E V P D G Y B77 B78 B79 B80 B81 B83 B84 B85 N V S R L K K Q B86 B87 B88 B89 B90 B91 B92 B93 N F L L G L E S B94 B95 B96 B97 B98 B99 B100 B101 A A P S Q T S V B102 B103 B104 B105 B106 B107 B108 B109 Y F C A S R Y F B110 B111 B112A B112 B113 B114 B115 B116 L P T Q G M G A B117 B118 B119 B120 B121 B122 B123 B124 F F G Q G T R L B125 B126 B127 T V V
VA	G	FASTA file	A1 A2 A3 A4 A5 A6 A7 A8 Q K E V E Q D P A9 A10 A11 A12 A13 A14 A15 A16 G P L S V P E G A17 A18 A19 A20 A21 A22 A23 A24 A I V S L N C T A25 A26 A27 A28 A29 A36 A37 A38 Y S N S A F Q Y A39 A40 A41 A42 A43 A44 A45 A46 F M W Y R Q Y S A47 A48 A49 A50 A51 A52 A53 A54 R K G P E L L M A55 A56 A57 A58 A63 A64 A65 A66 Y T Y S S G N K A67 A68 A74 A75 A76 A77 A78 A79 E D G R F T A Q A80 A81 A82 A83 A84 A85 A86 A87 V D K S S K Y I A88 A89 A90 A91 A92 A93 A94 A95 S L F I R D S Q A96 A97 A98 A99 A100 A101 A102 A103 P S D S A T Y L A104 A105 A106 A107 A108 A109 A110 A111 C A M S T S L P A112 A113 A114 A115 A116 A117 A118 A119 N A G K S T F G A120 A121 A122 A123 A124 A125 A126 A127 D G T T L T V K A128 P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASRYFLPTQGMGAF	None	14
CDRB2	SVGEGT	None	6
CDRB1	MNHEY	None	5
CDRA3	AMSTSLPNAGKST	None	13
CDRA2	TYSSGN	A2-6-B	6
CDRA1	NSAFQY	None	6

Orientation and docking angles:

Angle	Value
BC2	103.89°
BC1	71.32°
BA	-59.69°
AC2	77.11°
AC1	123.97°
dc	16.76Å
Docking angle	81.06°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
4pj9_DC	104.86°	71.22°	-60.09°	78.08°	123.45°	16.71Å	1.5
5wlg_JI	103.68°	71.72°	-59.80°	75.45°	123.46°	16.54Å	1.8
1mwa_BA	104.83°	72.25°	-59.58°	77.40°	122.34°	16.58Å	2.1
8i5c_nm	104.21°	72.97°	-60.48°	78.59°	123.50°	16.53Å	2.4
4y19_ED	105.67°	70.75°	-60.69°	78.09°	123.81°	16.38Å	2.4

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
4yfl_FI	106.92°	71.36°	-64.48°	73.60°	120.95°	15.85Å	7.4
1cfq_BA	106.86°	67.47°	-56.63°	80.83°	119.58°	16.37Å	8.1
1nma_HL	109.88°	72.48°	-61.03°	81.63°	120.29°	16.40Å	8.6
1ghf_HL	110.63°	71.68°	-61.52°	81.98°	122.12°	16.05Å	8.7
1nmc_HL	110.09°	71.80°	-64.06°	80.19°	120.88°	16.16Å	8.8