TCR Details:

Item	Info
VB chain	E
VA chain	D
VB IMGT details	TRBV5/TRBJ2
VA IMGT details	TRAV12/TRAJ41
Species	human

Antigen Details:

Item	Info
Antigen Chain	C
Antigen Type	Peptide
Antigen Organism	HUMAN IMMUNODEFICIENCY VIRUS 1
Antigen Sequence	SLYNTVATL
Antigen Length	9

MHC details:

Item	Info
MHC Chain	A | B
MHC Type	MH1
MHC Species	human
MHC IMGT details	HLA-A*0201

Numbered sequence

Chain type	Chain ID	FASTA/Annotation file	IMGT numbered sequence (Framework/CDR)
VB	E	FASTA file	B1 B2 B3 B4 B5 B6 B7 B8 D A G V T Q S P B9 B10 B11 B12 B13 B14 B15 B16 T H L I K T R G B17 B18 B19 B20 B21 B22 B23 B24 Q Q V T L R C S B25 B26 B27 B28 B29 B37 B38 B39 P K Q G H D T V B40 B41 B42 B43 B44 B45 B46 B47 S W Y Q Q A L G B48 B49 B50 B51 B52 B53 B54 B55 Q G P Q F I F Q B56 B57 B58 B63 B64 B65 B66 B67 Y Y E E E E R Q B68 B69 B70 B71 B72 B74 B75 B76 R G N F P D R F B77 B78 B79 B80 B81 B83 B84 B85 S G H Q F P N Y B86 B87 B88 B89 B90 B91 B92 B93 S S E L N V N A B94 B95 B96 B97 B98 B99 B100 B101 L L L G D S A L B102 B103 B104 B105 B106 B107 B108 B109 Y L C A S S D T B110 B113 B114 B115 B116 B117 B118 B119 V S Y E Q Y F G B120 B121 B122 B123 B124 B125 B126 B127 P G T R L T V T
VA	D	FASTA file	A2 A3 A4 A5 A6 A7 A8 A9 K E V E Q N S G A10 A11 A12 A13 A14 A15 A16 A17 P L S V P E G A A18 A19 A20 A21 A22 A23 A24 A25 I A S L N C T Y A26 A27 A28 A29 A36 A37 A38 A39 S D R G S Q S F A40 A41 A42 A43 A44 A45 A46 A47 F W Y R Q Y S G A48 A49 A50 A51 A52 A53 A54 A55 K S P E L I M F A56 A57 A58 A63 A64 A65 A66 A67 I Y S N G D K E A68 A74 A75 A76 A77 A78 A79 A80 D G R F T A Q L A81 A82 A83 A84 A85 A86 A87 A88 N K A S Q Y I S A89 A90 A91 A92 A93 A94 A95 A96 L L I R D S K L A97 A98 A99 A100 A101 A102 A103 A104 S D S A T Y L C A105 A106 A107 A108 A109 A110 A113 A114 A V R T N S G Y A115 A116 A117 A118 A119 A120 A121 A122 A L N F G K G T A123 A124 A125 A126 A127 A128 S L L V T P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASSDTVSYEQY	None	11
CDRB2	YYEEEE	None	6
CDRB1	QGHDT	None	5
CDRA3	AVRTNSGYALN	None	11
CDRA2	IYSNGD	None	6
CDRA1	DRGSQS	None	6

Orientation and docking angles:

Angle	Value
BC2	106.95°
BC1	76.37°
BA	-60.59°
AC2	80.74°
AC1	120.38°
dc	15.51Å
Docking angle	52.38°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
5nmg_ED	107.26°	76.37°	-59.58°	81.55°	120.22°	15.37Å	1.3
5nmf_JI	105.95°	76.00°	-61.13°	79.92°	120.15°	15.36Å	1.5
6dfs_BA	108.16°	76.95°	-59.83°	81.45°	120.03°	15.35Å	1.7
5nmg_JI	105.93°	75.84°	-59.97°	82.23°	119.89°	15.38Å	2.0
7n2q_GE	106.59°	76.10°	-61.16°	78.55°	120.08°	15.80Å	2.3

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
1dlf_HL	110.03°	78.05°	-59.13°	79.41°	118.65°	15.73Å	4.4
1nma_HL	109.88°	72.48°	-61.03°	81.63°	120.29°	16.40Å	5.1
3mo1_BA	109.77°	73.00°	-58.46°	81.03°	119.12°	16.26Å	5.1
1dbk_HL	110.44°	73.17°	-62.13°	81.71°	119.85°	16.60Å	5.2
2dbl_HL	110.84°	73.37°	-61.14°	82.14°	120.45°	16.63Å	5.3

TCR Details:

Item	Info
VB chain	J
VA chain	I
VB IMGT details	TRBV5/TRBJ2
VA IMGT details	TRAV12/TRAJ41
Species	human

Antigen Details:

Item	Info
Antigen Chain	H
Antigen Type	Peptide
Antigen Organism	HUMAN IMMUNODEFICIENCY VIRUS 1
Antigen Sequence	SLYNTVATL
Antigen Length	9

MHC details:

Item	Info
MHC Chain	F | G
MHC Type	MH1
MHC Species	human
MHC IMGT details	HLA-A*0201

Numbered sequence

Chain type	Chain ID	FASTA/Annotation file	IMGT numbered sequence (Framework/CDR)
VB	J	FASTA file	B1 B2 B3 B4 B5 B6 B7 B8 D A G V T Q S P B9 B10 B11 B12 B13 B14 B15 B16 T H L I K T R G B17 B18 B19 B20 B21 B22 B23 B24 Q Q V T L R C S B25 B26 B27 B28 B29 B37 B38 B39 P K Q G H D T V B40 B41 B42 B43 B44 B45 B46 B47 S W Y Q Q A L G B48 B49 B50 B51 B52 B53 B54 B55 Q G P Q F I F Q B56 B57 B58 B63 B64 B65 B66 B67 Y Y E E E E R Q B68 B69 B70 B71 B72 B74 B75 B76 R G N F P D R F B77 B78 B79 B80 B81 B83 B84 B85 S G H Q F P N Y B86 B87 B88 B89 B90 B91 B92 B93 S S E L N V N A B94 B95 B96 B97 B98 B99 B100 B101 L L L G D S A L B102 B103 B104 B105 B106 B107 B108 B109 Y L C A S S D T B110 B113 B114 B115 B116 B117 B118 B119 V S Y E Q Y F G B120 B121 B122 B123 B124 B125 B126 B127 P G T R L T V T
VA	I	FASTA file	A2 A3 A4 A5 A6 A7 A8 A9 K E V E Q N S G A10 A11 A12 A13 A14 A15 A16 A17 P L S V P E G A A18 A19 A20 A21 A22 A23 A24 A25 I A S L N C T Y A26 A27 A28 A29 A36 A37 A38 A39 S D R G S Q S F A40 A41 A42 A43 A44 A45 A46 A47 F W Y R Q Y S G A48 A49 A50 A51 A52 A53 A54 A55 K S P E L I M F A56 A57 A58 A63 A64 A65 A66 A67 I Y S N G D K E A68 A74 A75 A76 A77 A78 A79 A80 D G R F T A Q L A81 A82 A83 A84 A85 A86 A87 A88 N K A S Q Y I S A89 A90 A91 A92 A93 A94 A95 A96 L L I R D S K L A97 A98 A99 A100 A101 A102 A103 A104 S D S A T Y L C A105 A106 A107 A108 A109 A110 A113 A114 A V R T N S G Y A115 A116 A117 A118 A119 A120 A121 A122 A L N F G K G T A123 A124 A125 A126 A127 A128 S L L V T P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASSDTVSYEQY	None	11
CDRB2	YYEEEE	None	6
CDRB1	QGHDT	None	5
CDRA3	AVRTNSGYALN	None	11
CDRA2	IYSNGD	None	6
CDRA1	DRGSQS	None	6

Orientation and docking angles:

Angle	Value
BC2	105.68°
BC1	76.02°
BA	-61.00°
AC2	81.69°
AC1	119.86°
dc	15.53Å
Docking angle	52.37°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
5nmg_JI	105.93°	75.84°	-59.97°	82.23°	119.89°	15.38Å	1.2
5nmf_ED	105.02°	75.52°	-60.22°	81.31°	119.71°	15.44Å	1.2
5nmf_JI	105.95°	76.00°	-61.13°	79.92°	120.15°	15.36Å	1.8
5nmg_ED	107.26°	76.37°	-59.58°	81.55°	120.22°	15.37Å	2.2
6dfs_BA	108.16°	76.95°	-59.83°	81.45°	120.03°	15.35Å	2.9

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
4dcq_BA	108.30°	73.42°	-64.76°	82.94°	120.98°	16.23Å	5.6
1nma_HL	109.88°	72.48°	-61.03°	81.63°	120.29°	16.40Å	5.6
1dbk_HL	110.44°	73.17°	-62.13°	81.71°	119.85°	16.60Å	5.8
1dlf_HL	110.03°	78.05°	-59.13°	79.41°	118.65°	15.73Å	5.8
3mo1_BA	109.77°	73.00°	-58.46°	81.03°	119.12°	16.26Å	5.8