TCR Details:

Item	Info
VB chain	D
VA chain	C
VB IMGT details	TRBV13/TRBJ1
VA IMGT details	TRAV4/TRAJ32
Species	mouse

Antigen Details:

Item	Info
Antigen Chain	P
Antigen Type	Peptide
Antigen Organism	GALLUS GALLUS
Antigen Sequence	GAMKRHGLDNYRGYSLGN
Antigen Length	18

MHC details:

Item	Info
MHC Chain	A | B
MHC Type	MH2
MHC Species	mouse
MHC IMGT details	MH2-AAd / H2-AB-NOD

Numbered sequence

Chain type	Chain ID	FASTA/Annotation file	IMGT numbered sequence (Framework/CDR)
VB	D	FASTA file	B1 B2 B3 B4 B5 B6 B7 B8 E A A V T Q S P B9 B10 B11 B12 B13 B14 B15 B16 R S K V A V T G B17 B18 B19 B20 B21 B22 B23 B24 G K V T L S C H B25 B26 B27 B28 B29 B37 B38 B39 Q T N N H D Y M B40 B41 B42 B43 B44 B45 B46 B47 Y W Y R Q D T G B48 B49 B50 B51 B52 B53 B54 B55 H G L R L I H Y B56 B57 B58 B63 B64 B65 B66 B67 S Y V A D S T E B68 B69 B70 B71 B72 B74 B75 B76 K G D I P D G Y B77 B78 B79 B80 B81 B83 B84 B85 K A S R P S Q E B86 B87 B88 B89 B90 B91 B92 B93 N F S L I L E L B94 B95 B96 B97 B98 B99 B100 B101 A S L S Q T A V B102 B103 B104 B105 B106 B107 B108 B109 Y F C A S S W D B110 B112 B113 B114 B115 B116 B117 B118 R A G N T L Y F B119 B120 B121 B122 B123 B124 B125 B126 G E G S R L I V B127 V
VA	C	FASTA file	A1 A2 A3 A4 A5 A6 A7 A8 G M P V E Q N P A9 A10 A11 A12 A13 A14 A15 A16 P A L S L Y E G A17 A18 A19 A20 A21 A22 A23 A24 A D S G L R C N A25 A26 A27 A28 A29 A37 A38 A39 F S T T M K S V A40 A41 A42 A43 A44 A45 A46 A47 Q W F Q Q N H R A48 A49 A50 A51 A52 A53 A54 A55 G R L I T L F Y A56 A57 A58 A64 A65 A66 A67 A68 L A Q G T K E N A74 A75 A76 A77 A78 A79 A80 A81 G R L K S T F N A82 A83 A84 A85 A86 A87 A88 A89 S K E R Y S T L A90 A91 A92 A93 A94 A95 A96 A97 H I K D A Q L E A98 A99 A100 A101 A102 A103 A104 A105 D S G T Y F C A A106 A107 A108 A109 A110 A112 A113 A114 A E D G G S G N A115 A116 A117 A118 A119 A120 A121 A122 K L I F G T G T A123 A124 A125 A126 A127 A128 L L S V K P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASSWDRAGNTLY	None	12
CDRB2	SYVADS	None	6
CDRB1	NNHDY	None	5
CDRA3	AAEDGGSGNKLI	None	12
CDRA2	LAQGT	None	5
CDRA1	TTMKS	None	5

Orientation and docking angles:

Angle	Value
BC2	105.96°
BC1	75.46°
BA	-53.75°
AC2	79.63°
AC1	121.96°
dc	15.91Å
Docking angle	46.83°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
2q86_DC	104.79°	75.52°	-52.30°	78.86°	123.56°	16.37Å	2.6
5wkf_JI	104.85°	73.91°	-55.54°	78.85°	123.53°	15.85Å	3.1
8pjg_ED	107.15°	76.54°	-55.23°	79.04°	124.10°	15.99Å	3.1
6r0e_ED	107.34°	76.53°	-55.56°	78.95°	123.84°	16.03Å	3.2
6fun_BA	105.96°	77.65°	-51.97°	78.02°	122.30°	16.28Å	3.3

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
4yfl_HL	109.78°	73.75°	-56.79°	79.59°	122.71°	16.13Å	5.2
3mnz_BA	108.41°	71.26°	-53.27°	82.05°	121.70°	16.38Å	5.5
3mnw_BA	107.15°	71.13°	-53.34°	82.80°	121.51°	16.47Å	5.6
1fj1_DC	109.78°	71.11°	-51.69°	80.11°	123.02°	16.12Å	6.3
1mlc_DC	111.18°	74.81°	-53.86°	82.25°	119.71°	16.04Å	6.3

TCR Details:

Item	Info
VB chain	H
VA chain	G
VB IMGT details	TRBV13/TRBJ1
VA IMGT details	TRAV4/TRAJ32
Species	mouse

Antigen Details:

Item	Info
Antigen Chain	Q
Antigen Type	Peptide
Antigen Organism	GALLUS GALLUS
Antigen Sequence	GAMKRHGLDNYRGYSLGN
Antigen Length	18

MHC details:

Item	Info
MHC Chain	E | F
MHC Type	MH2
MHC Species	mouse
MHC IMGT details	MH2-AAd / H2-AB-NOD

Numbered sequence

Chain type	Chain ID	FASTA/Annotation file	IMGT numbered sequence (Framework/CDR)
VB	H	FASTA file	B1 B2 B3 B4 B5 B6 B7 B8 E A A V T Q S P B9 B10 B11 B12 B13 B14 B15 B16 R S K V A V T G B17 B18 B19 B20 B21 B22 B23 B24 G K V T L S C H B25 B26 B27 B28 B29 B37 B38 B39 Q T N N H D Y M B40 B41 B42 B43 B44 B45 B46 B47 Y W Y R Q D T G B48 B49 B50 B51 B52 B53 B54 B55 H G L R L I H Y B56 B57 B58 B63 B64 B65 B66 B67 S Y V A D S T E B68 B69 B70 B71 B72 B74 B75 B76 K G D I P D G Y B77 B78 B79 B80 B81 B83 B84 B85 K A S R P S Q E B86 B87 B88 B89 B90 B91 B92 B93 N F S L I L E L B94 B95 B96 B97 B98 B99 B100 B101 A S L S Q T A V B102 B103 B104 B105 B106 B107 B108 B109 Y F C A S S W D B110 B112 B113 B114 B115 B116 B117 B118 R A G N T L Y F B119 B120 B121 B122 B123 B124 B125 B126 G E G S R L I V B127 V
VA	G	FASTA file	A1 A2 A3 A4 A5 A6 A7 A8 G M P V E Q N P A9 A10 A11 A12 A13 A14 A15 A16 P A L S L Y E G A17 A18 A19 A20 A21 A22 A23 A24 A D S G L R C N A25 A26 A27 A28 A29 A37 A38 A39 F S T T M K S V A40 A41 A42 A43 A44 A45 A46 A47 Q W F Q Q N H R A48 A49 A50 A51 A52 A53 A54 A55 G R L I T L F Y A56 A57 A58 A64 A65 A66 A67 A68 L A Q G T K E N A74 A75 A76 A77 A78 A79 A80 A81 G R L K S T F N A82 A83 A84 A85 A86 A87 A88 A89 S K E R Y S T L A90 A91 A92 A93 A94 A95 A96 A97 H I K D A Q L E A98 A99 A100 A101 A102 A103 A104 A105 D S G T Y F C A A106 A107 A108 A109 A110 A112 A113 A114 A E D G G S G N A115 A116 A117 A118 A119 A120 A121 A122 K L I F G T G T A123 A124 A125 A126 A127 A128 L L S V K P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASSWDRAGNTLY	None	12
CDRB2	SYVADS	None	6
CDRB1	NNHDY	None	5
CDRA3	AAEDGGSGNKLI	None	12
CDRA2	LAQGT	None	5
CDRA1	TTMKS	None	5

Orientation and docking angles:

Angle	Value
BC2	106.17°
BC1	75.59°
BA	-53.78°
AC2	80.04°
AC1	122.03°
dc	15.91Å
Docking angle	48.06°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
2q86_DC	104.79°	75.52°	-52.30°	78.86°	123.56°	16.37Å	2.8
8pjg_ED	107.15°	76.54°	-55.23°	79.04°	124.10°	15.99Å	3.0
6r0e_ED	107.34°	76.53°	-55.56°	78.95°	123.84°	16.03Å	3.1
1zgl_PM	105.89°	74.82°	-54.13°	81.91°	124.29°	16.53Å	3.1
1zgl_VU	105.45°	74.32°	-54.76°	81.33°	124.17°	16.62Å	3.1

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
4yfl_HL	109.78°	73.75°	-56.79°	79.59°	122.71°	16.13Å	5.1
3mnz_BA	108.41°	71.26°	-53.27°	82.05°	121.70°	16.38Å	5.3
3mnw_BA	107.15°	71.13°	-53.34°	82.80°	121.51°	16.47Å	5.4
1mlc_DC	111.18°	74.81°	-53.86°	82.25°	119.71°	16.04Å	6.0
1fj1_DC	109.78°	71.11°	-51.69°	80.11°	123.02°	16.12Å	6.2