TCR Details:

Item	Info
VB chain	D
VA chain	C
VB IMGT details	TRBV1/TRBJ2
VA IMGT details	TRAV11/TRAJ18
Species	mouse

Antigen Details:

Item	Info
Antigen Chain	A
Antigen Type	Carbohydrate
Antigen Organism	MUS MUSCULUS
Antigen name	N-{(1S,2R,3S)-1-[(ALPHA-D-GALACTOPYRANOSYLOXY)METHYL]-2,3-DIHYDROXYHEPTADECYL}HEXACOSANAMIDE
Antigen residue	AGH

MHC details:

Item	Info
MHC Chain	A | B
MHC Type	CD1
MHC Species	mouse
MHC IMGT details	CD1D1*01

Numbered sequence

Chain type	Chain ID	FASTA/Annotation file	IMGT numbered sequence (Framework/CDR)
VB	D	FASTA file	B1 B2 B3 B4 B5 B6 B7 B8 V T L L E Q N P B9 B10 B11 B12 B13 B14 B15 B16 R W R L V P R G B17 B18 B19 B20 B21 B22 B23 B24 Q A V N L R C I B25 B26 B27 B28 B29 B36 B37 B38 L K N S Q Y P W B39 B40 B41 B42 B43 B44 B45 B46 M S W Y Q Q D L B47 B48 B49 B50 B51 B52 B53 B54 Q K Q L Q W L F B55 B56 B57 B58 B63 B64 B65 B66 T L R S P G D K B67 B68 B69 B70 B71 B72 B73 B74 E V K S L P G A B75 B76 B77 B78 B79 B80 B81 B83 D Y L A T R V T B84 B85 B86 B87 B88 B89 B90 B91 D T E L R L Q V B92 B93 B94 B95 B98 B99 B100 B101 A N M S Q G R T B102 B103 B104 B105 B106 B107 B108 B109 L Y C T S S A D B110 B111 B112A B112 B113 B114 B115 B116 H W T N T G Q L B117 B118 B119 B120 B121 B122 B123 B124 Y F G E G S K L B125 B126 B127 T V L
VA	C	FASTA file	A2 A3 A4 A5 A6 A7 A8 A9 T Q V E Q S P Q A10 A11 A12 A13 A14 A15 A16 A17 S L V V R Q G E A18 A19 A20 A21 A22 A23 A24 A25 N S V L Q C N Y A26 A27 A28 A29 A36 A37 A38 A39 S V T P D N H L A40 A41 A42 A43 A44 A45 A46 A47 R W F K Q D T G A48 A49 A50 A51 A52 A53 A54 A55 K G L V S L T V A56 A57 A58 A59 A63 A64 A65 A66 L V D Q K D K T A67 A68 A74 A75 A76 A77 A78 A79 S N G R Y S A T A80 A81 A82 A83 A84 A85 A86 A87 L D K D A K H S A88 A89 A90 A91 A92 A93 A94 A95 T L H I T A T L A96 A97 A98 A99 A100 A101 A102 A103 L D D T A T Y I A104 A105 A106 A107 A108 A109 A110 A111 C V V G D R G S A112 A113 A114 A115 A116 A117 A118 A119 A L G R L H F G A120 A121 A122 A123 A124 A125 A126 A127 A G T Q L I V I A128 P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	TSSADHWTNTGQLY	None	14
CDRB2	LRSPGD	B2-6-C	6
CDRB1	NSQYPW	B1-6-A	6
CDRA3	VVGDRGSALGRLH	None	13
CDRA2	LVDQKDK	A2-7-C	7
CDRA1	VTPDNH	None	6

Orientation and docking angles:

Angle	Value
BC2	107.02°
BC1	83.63°
BA	-53.43°
AC2	83.97°
AC1	121.57°
dc	15.42Å
Docking angle	27.55°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
1kj2_BA	108.32°	85.39°	-51.99°	82.20°	121.44°	15.47Å	3.2
1kj2_ED	110.30°	84.69°	-50.38°	82.85°	122.32°	15.59Å	4.8
3uts_JI	108.87°	79.90°	-58.16°	82.82°	121.85°	15.91Å	6.4
6dfq_BA	107.29°	78.06°	-56.66°	82.85°	120.36°	15.24Å	6.7
6dfq_FE	106.35°	79.02°	-57.24°	81.44°	120.30°	15.27Å	6.7