Structure summary for 7ryo

Detailed entry information.

Details for 7ryo

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Structure information

CD1a-Dideoxymycobactin-GdTCR complex

Item	Info
PDB	7ryo
Organism	HOMO SAPIENS
Method	X-RAY DIFFRACTION
Resolution	3Å
Number of TCRs	1

Paired chains information

This PDB has 1 TCR(s).

D / C

TCR Details:

Item	Info
VD chain	D
VG chain	C
VD IMGT details	TRDV1/TRDJ1
VG IMGT details	TRGV4/TRGJ1
Species	human

Numbered sequence

Chain type

Chain ID

FASTA/Annotation file

IMGT numbered sequence (Framework/CDR)

VD

D

D1	D2	D3	D4	D5	D6	D7	D8
A	Q	K	V	T	Q	A	Q
D9	D10	D11	D12	D13	D14	D15	D16
S	S	V	S	M	P	V	R
D17	D18	D19	D20	D21	D22	D23	D24
K	A	V	T	L	N	C	L
D25	D26	D27	D28	D29	D30	D36	D37
Y	E	T	S	W	W	S	Y
D38	D39	D40	D41	D42	D43	D44	D45
Y	I	F	W	Y	K	Q	L
D46	D47	D48	D49	D50	D51	D52	D53
P	S	K	E	M	I	F	L
D54	D55	D56	D57	D58	D59	D63	D64
I	R	Q	G	S	D	E	Q
D65	D66	D67	D68	D74	D75	D76	D77
N	A	K	S	G	R	Y	S
D78	D79	D80	D81	D82	D83	D84	D85
V	N	F	K	K	A	A	K
D86	D87	D88	D89	D90	D91	D92	D93
S	V	A	L	T	I	S	A
D94	D95	D96	D97	D98	D99	D100	D101
L	Q	L	E	D	S	A	K
D102	D103	D104	D105	D106	D107	D108	D109
Y	F	C	A	L	G	E	L
D110	D112	D113	D114	D115	D116	D117	D118
R	W	P	D	K	L	I	F
D119	D120	D121	D122	D123	D124	D125	D126
G	K	G	T	R	V	T	V
D127	D128
E	P

VG

C

G1	G2	G3	G4	G5	G6	G7	G8
S	S	N	L	E	G	R	T
G9	G10	G11	G12	G13	G14	G15	G16
K	S	V	I	R	Q	T	G
G17	G18	G19	G20	G21	G22	G23	G24
S	S	A	E	I	T	C	D
G25	G26	G27	G28	G29	G36	G37	G38
L	A	E	G	S	T	G	Y
G39	G40	G41	G42	G43	G44	G45	G46
I	H	W	Y	L	H	Q	E
G47	G48	G49	G50	G51	G52	G53	G54
G	K	A	P	Q	R	L	L
G55	G56	G57	G58	G59	G62	G63	G64
Y	Y	D	S	Y	T	S	S
G65	G66	G67	G68	G69	G70	G71	G72
V	V	L	E	S	G	I	S
G73	G74	G75	G76	G77	G78	G79	G80
P	G	K	Y	D	T	Y	G
G81	G83	G84	G85	G86	G87	G88	G89
S	T	R	K	N	L	R	M
G90	G91	G92	G93	G94	G95	G96	G97
I	L	R	N	L	I	E	N
G98	G99	G100	G101	G102	G103	G104	G105
D	S	G	V	Y	Y	C	A
G106	G107	G108	G109	G110	G113	G114	G115
T	W	D	G	D	Y	Y	K
G116	G117	G118	G119	G120	G121	G122	G123
K	L	F	G	S	G	T	T
G124	G125	G126	G127
L	V	V	T

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRD1	TSWWSYY	None	7
CDRD2	QGSDEQN	None	7
CDRD3	ALGELRWPDKLI	None	12
CDRG1	EGSTGY	None	6
CDRG2	YDSYTSSV	None	8
CDRG3	ATWDGDYYKKL	None	11

Available downloads

Additional links and files for download: see help for more details.

Item	Link
IMGT-numbered structure	Link
Non-annotated structure from the PDB	Link
Summary file for this TCR	Link
Link in the PDB	Link