Structure Viewer: 5d9q

> Structure details

Crystal Structure of the Bg505 Sosip Gp140 Hiv-1 Env Trimer in complex with the Broadly Neutralizing Fab Pgt122 and Scfv Nih45-46

PDB	5d9q
Species	HOMO SAPIENS
Method	X-RAY DIFFRACTION
Resolution	4.4Å
Number of Fvs	6
In complex	True
Light chain type	unknown,Lambda
Has constant region	True

> Fv information

This PDB has 6 Fv(s).

Fv Details
Heavy chain	D
Light chain	D
Heavy subgroup	unknown
Light subgroup	unknown
Species	HOMO SAPIENS
In complex?	True
scFv?	True
Has constant domain?	False

Numbered Sequences (chothia)

Heavy chain

1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	52A	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	82A	82B	82C	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	100A	100B	100C	100D	100E	100F	100G	100H	101	102	103	104	105	106	107	108	109	110	111	112	113
E	V	R	L	S	Q	S	G	G	Q	M	K	K	P	G	E	S	M	R	L	S	C	R	A	S	G	Y	E	F	L	N	C	P	I	N	W	I	R	L	A	P	G	R	R	P	E	W	M	G	W	L	K	P	R	G	G	A	V	N	Y	A	R	K	F	Q	G	R	V	T	M	T	R	D	V	Y	S	D	T	A	F	L	E	L	R	S	L	T	S	D	D	T	A	V	Y	F	C	T	R	G	K	Y	C	T	A	R	D	Y	Y	N	W	D	F	E	H	W	G	R	G	A	P	V	T	V	S	S

Light chain

1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	97	98	99	100	101	102	103	104	105	106
E	I	V	L	T	Q	S	P	A	T	L	S	L	S	P	G	E	T	A	I	I	S	C	R	T	S	Q	S	G	S	L	A	W	Y	Q	Q	R	P	G	Q	A	P	R	L	V	I	Y	S	G	S	T	R	A	A	G	I	P	D	R	F	S	G	S	R	W	G	A	D	Y	N	L	S	I	S	N	L	E	S	G	D	F	G	V	Y	Y	C	Q	Q	Y	E	F	F	G	Q	G	T	K	V	Q	V

Antigen Details
Antigen chains	G
Antigen type	protein
Antigen name	envelope glycoprotein gp120
Antigen species	HUMAN IMMUNODEFICIENCY VIRUS 1
Antigen sequence	AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGANNTSTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRR

CDR Sequences (chothia definition)
CDRH1	GYEFLNC
CDRH2	KPRGGA
CDRH3	GKYCTARDYYNWDFEH
CDRL1	RTSQSGSLA
CDRL2	SGSTRAA
CDRL3	QQYEF

Orientation Angles (from ABangle)
HL	-61.65°
HC1	76.35°
HC2	110.74°
LC1	122.02°
LC2	80.95°
dc	15.39Å

Fv Details
Heavy chain	F
Light chain	E
Heavy subgroup	IGHV4
Light subgroup	IGLV3
Species	HOMO SAPIENS
In complex?	True
scFv?	False
Has constant domain?	True

Numbered Sequences (chothia)

Heavy chain

1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	82A	82B	82C	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	100A	100B	100C	100D	100E	100F	100G	100H	100I	100J	100K	100L	100M	100N	100O	100P	101	102	103	104	105	106	107	108	109	110	111	112	113
Q	V	H	L	Q	E	S	G	P	G	L	V	K	P	S	E	T	L	S	L	T	C	Q	V	S	G	T	L	V	R	D	N	Y	W	S	W	I	R	Q	P	L	G	K	Q	P	E	W	I	G	Y	V	H	D	S	G	D	T	N	Y	N	P	S	L	K	S	R	V	H	L	S	L	D	K	S	K	N	L	V	S	L	R	L	T	G	V	T	A	A	D	S	A	I	Y	Y	C	A	T	T	K	H	G	R	R	I	Y	G	V	V	A	F	K	E	W	F	T	Y	F	Y	M	D	V	W	G	K	G	T	S	V	T	V	S	S

Light chain

11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	66A	66B	66C	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	95A	95B	95C	96	97	98	99	100	101	102	103	104	105	106	107
V	S	V	A	P	G	Q	T	A	R	I	T	C	G	E	E	S	L	G	S	R	S	V	I	W	Y	Q	Q	R	P	G	Q	A	P	S	L	I	I	Y	N	N	N	D	R	P	S	G	I	P	D	R	F	S	G	S	P	G	S	T	F	G	T	T	A	T	L	T	I	T	S	V	E	A	G	D	E	A	D	Y	Y	C	H	I	W	D	S	R	R	P	T	N	W	V	F	G	E	G	T	T	L	I	V	L

Antigen Details
Antigen chains	A
Antigen type	protein
Antigen name	envelope glycoprotein gp120
Antigen species	HUMAN IMMUNODEFICIENCY VIRUS 1
Antigen sequence	AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGANNTSTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRR

CDR Sequences (chothia definition)
CDRH1	GTLVRDN
CDRH2	HDSGD
CDRH3	TKHGRRIYGVVAFKEWFTYFYMDV
CDRL1	GEESLGSRSVI
CDRL2	NNNDRPS
CDRL3	HIWDSRRPTNWV

Orientation Angles (from ABangle)
HL	-64.41°
HC1	75.09°
HC2	123.7°
LC1	117.64°
LC2	85.48°
dc	16.62Å

Fv Details
Heavy chain	H
Light chain	L
Heavy subgroup	IGHV4
Light subgroup	IGLV3
Species	HOMO SAPIENS
In complex?	True
scFv?	False
Has constant domain?	True

Numbered Sequences (chothia)

Heavy chain

1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	82A	82B	82C	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	100A	100B	100C	100D	100E	100F	100G	100H	100I	100J	100K	100L	100M	100N	100O	100P	101	102	103	104	105	106	107	108	109	110	111	112	113
Q	V	H	L	Q	E	S	G	P	G	L	V	K	P	S	E	T	L	S	L	T	C	Q	V	S	G	T	L	V	R	D	N	Y	W	S	W	I	R	Q	P	L	G	K	Q	P	E	W	I	G	Y	V	H	D	S	G	D	T	N	Y	N	P	S	L	K	S	R	V	H	L	S	L	D	K	S	K	N	L	V	S	L	R	L	T	G	V	T	A	A	D	S	A	I	Y	Y	C	A	T	T	K	H	G	R	R	I	Y	G	V	V	A	F	K	E	W	F	T	Y	F	Y	M	D	V	W	G	K	G	T	S	V	T	V	S	S

Light chain

11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	66A	66B	66C	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	95A	95B	95C	96	97	98	99	100	101	102	103	104	105	106	107
V	S	V	A	P	G	Q	T	A	R	I	T	C	G	E	E	S	L	G	S	R	S	V	I	W	Y	Q	Q	R	P	G	Q	A	P	S	L	I	I	Y	N	N	N	D	R	P	S	G	I	P	D	R	F	S	G	S	P	G	S	T	F	G	T	T	A	T	L	T	I	T	S	V	E	A	G	D	E	A	D	Y	Y	C	H	I	W	D	S	R	R	P	T	N	W	V	F	G	E	G	T	T	L	I	V	L

Antigen Details
Antigen chains	G
Antigen type	protein
Antigen name	envelope glycoprotein gp120
Antigen species	HUMAN IMMUNODEFICIENCY VIRUS 1
Antigen sequence	AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGANNTSTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRR

CDR Sequences (chothia definition)
CDRH1	GTLVRDN
CDRH2	HDSGD
CDRH3	TKHGRRIYGVVAFKEWFTYFYMDV
CDRL1	GEESLGSRSVI
CDRL2	NNNDRPS
CDRL3	HIWDSRRPTNWV

Orientation Angles (from ABangle)
HL	-64.38°
HC1	75.09°
HC2	123.46°
LC1	117.58°
LC2	85.49°
dc	16.6Å

Fv Details
Heavy chain	N
Light chain	M
Heavy subgroup	IGHV4
Light subgroup	IGLV3
Species	HOMO SAPIENS
In complex?	True
scFv?	False
Has constant domain?	True

Numbered Sequences (chothia)

Heavy chain

1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	82A	82B	82C	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	100A	100B	100C	100D	100E	100F	100G	100H	100I	100J	100K	100L	100M	100N	100O	100P	101	102	103	104	105	106	107	108	109	110	111	112	113
Q	V	H	L	Q	E	S	G	P	G	L	V	K	P	S	E	T	L	S	L	T	C	Q	V	S	G	T	L	V	R	D	N	Y	W	S	W	I	R	Q	P	L	G	K	Q	P	E	W	I	G	Y	V	H	D	S	G	D	T	N	Y	N	P	S	L	K	S	R	V	H	L	S	L	D	K	S	K	N	L	V	S	L	R	L	T	G	V	T	A	A	D	S	A	I	Y	Y	C	A	T	T	K	H	G	R	R	I	Y	G	V	V	A	F	K	E	W	F	T	Y	F	Y	M	D	V	W	G	K	G	T	S	V	T	V	S	S

Light chain

11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	66A	66B	66C	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	95A	95B	95C	96	97	98	99	100	101	102	103	104	105	106	107
V	S	V	A	P	G	Q	T	A	R	I	T	C	G	E	E	S	L	G	S	R	S	V	I	W	Y	Q	Q	R	P	G	Q	A	P	S	L	I	I	Y	N	N	N	D	R	P	S	G	I	P	D	R	F	S	G	S	P	G	S	T	F	G	T	T	A	T	L	T	I	T	S	V	E	A	G	D	E	A	D	Y	Y	C	H	I	W	D	S	R	R	P	T	N	W	V	F	G	E	G	T	T	L	I	V	L

Antigen Details
Antigen chains	J
Antigen type	protein
Antigen name	envelope glycoprotein gp120
Antigen species	HUMAN IMMUNODEFICIENCY VIRUS 1
Antigen sequence	AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGANNTSTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRR

CDR Sequences (chothia definition)
CDRH1	GTLVRDN
CDRH2	HDSGD
CDRH3	TKHGRRIYGVVAFKEWFTYFYMDV
CDRL1	GEESLGSRSVI
CDRL2	NNNDRPS
CDRL3	HIWDSRRPTNWV

Orientation Angles (from ABangle)
HL	-64.23°
HC1	75.17°
HC2	123.55°
LC1	117.79°
LC2	85.57°
dc	16.61Å

Fv Details
Heavy chain	I
Light chain	I
Heavy subgroup	unknown
Light subgroup	unknown
Species	HOMO SAPIENS
In complex?	True
scFv?	True
Has constant domain?	False

Numbered Sequences (chothia)

Heavy chain

1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	52A	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	82A	82B	82C	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	100A	100B	100C	100D	100E	100F	100G	100H	101	102	103	104	105	106	107	108	109	110	111	112	113
E	V	R	L	S	Q	S	G	G	Q	M	K	K	P	G	E	S	M	R	L	S	C	R	A	S	G	Y	E	F	L	N	C	P	I	N	W	I	R	L	A	P	G	R	R	P	E	W	M	G	W	L	K	P	R	G	G	A	V	N	Y	A	R	K	F	Q	G	R	V	T	M	T	R	D	V	Y	S	D	T	A	F	L	E	L	R	S	L	T	S	D	D	T	A	V	Y	F	C	T	R	G	K	Y	C	T	A	R	D	Y	Y	N	W	D	F	E	H	W	G	R	G	A	P	V	T	V	S	S

Light chain

1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	97	98	99	100	101	102	103	104	105	106
E	I	V	L	T	Q	S	P	A	T	L	S	L	S	P	G	E	T	A	I	I	S	C	R	T	S	Q	S	G	S	L	A	W	Y	Q	Q	R	P	G	Q	A	P	R	L	V	I	Y	S	G	S	T	R	A	A	G	I	P	D	R	F	S	G	S	R	W	G	A	D	Y	N	L	S	I	S	N	L	E	S	G	D	F	G	V	Y	Y	C	Q	Q	Y	E	F	F	G	Q	G	T	K	V	Q	V

Antigen Details
Antigen chains	A
Antigen type	protein
Antigen name	envelope glycoprotein gp120
Antigen species	HUMAN IMMUNODEFICIENCY VIRUS 1
Antigen sequence	AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGANNTSTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRR

CDR Sequences (chothia definition)
CDRH1	GYEFLNC
CDRH2	KPRGGA
CDRH3	GKYCTARDYYNWDFEH
CDRL1	RTSQSGSLA
CDRL2	SGSTRAA
CDRL3	QQYEF

Orientation Angles (from ABangle)
HL	-61.67°
HC1	76.23°
HC2	110.67°
LC1	122.06°
LC2	80.81°
dc	15.39Å

Fv Details
Heavy chain	O
Light chain	O
Heavy subgroup	unknown
Light subgroup	unknown
Species	HOMO SAPIENS
In complex?	True
scFv?	True
Has constant domain?	False

Numbered Sequences (chothia)

Heavy chain

1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	52A	53	54	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	82A	82B	82C	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99	100	100A	100B	100C	100D	100E	100F	100G	100H	101	102	103	104	105	106	107	108	109	110	111	112	113
E	V	R	L	S	Q	S	G	G	Q	M	K	K	P	G	E	S	M	R	L	S	C	R	A	S	G	Y	E	F	L	N	C	P	I	N	W	I	R	L	A	P	G	R	R	P	E	W	M	G	W	L	K	P	R	G	G	A	V	N	Y	A	R	K	F	Q	G	R	V	T	M	T	R	D	V	Y	S	D	T	A	F	L	E	L	R	S	L	T	S	D	D	T	A	V	Y	F	C	T	R	G	K	Y	C	T	A	R	D	Y	Y	N	W	D	F	E	H	W	G	R	G	A	P	V	T	V	S	S

Light chain

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E	I	V	L	T	Q	S	P	A	T	L	S	L	S	P	G	E	T	A	I	I	S	C	R	T	S	Q	S	G	S	L	A	W	Y	Q	Q	R	P	G	Q	A	P	R	L	V	I	Y	S	G	S	T	R	A	A	G	I	P	D	R	F	S	G	S	R	W	G	A	D	Y	N	L	S	I	S	N	L	E	S	G	D	F	G	V	Y	Y	C	Q	Q	Y	E	F	F	G	Q	G	T	K	V	Q	V

Antigen Details
Antigen chains	J
Antigen type	protein
Antigen name	envelope glycoprotein gp120
Antigen species	HUMAN IMMUNODEFICIENCY VIRUS 1
Antigen sequence	AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGANNTSTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRR

CDR Sequences (chothia definition)
CDRH1	GYEFLNC
CDRH2	KPRGGA
CDRH3	GKYCTARDYYNWDFEH
CDRL1	RTSQSGSLA
CDRL2	SGSTRAA
CDRL3	QQYEF

Orientation Angles (from ABangle)
HL	-61.67°
HC1	76.19°
HC2	110.78°
LC1	122.12°
LC2	80.81°
dc	15.39Å

Additional links and files for download: see help for more details.

Chothia-numbered structure	Download
IMGT-numbered structure	Download
Non-annotated structure from the PDB	Download
Summary file for this antibody	Download

Schneider, C., Raybould, M.I.J., Deane, C.M. (2022) SAbDab in the Age of Biotherapeutics: Updates including SAbDab-Nano, the Nanobody Structure Tracker. Nucleic Acids Res. 50(D1):D1368-D1372 [link]

SAbDab paper: Dunbar, J., Krawczyk, K. et al (2014). Nucleic Acids Res. 42. D1140-D1146 [link]

Thera-SAbDab paper: Raybould, M.I.J., Marks, C. et al (2019). Nucleic Acids Res. gkz827 [link]

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