TCR Details:

Item	Info
VB chain	E
VA chain	D
VB IMGT details	TRBV5/TRBJ2
VA IMGT details	TRAV12/TRAJ41
Species	human

Antigen Details:

Item	Info
Antigen Chain	C
Antigen Type	Peptide
Antigen Organism	HUMAN IMMUNODEFICIENCY VIRUS 1
Antigen Sequence	SLYNTIATL
Antigen Length	9

MHC details:

Item	Info
MHC Chain	A | B
MHC Type	MH1
MHC Species	human
MHC IMGT details	HLA-A*0201

Numbered sequence

Chain type	Chain ID	FASTA/Annotation file	IMGT numbered sequence (Framework/CDR)
VB	E	FASTA file	B2 B3 B4 B5 B6 B7 B8 B9 A G V T Q S P T B10 B11 B12 B13 B14 B15 B16 B17 H L I K T R G Q B18 B19 B20 B21 B22 B23 B24 B25 Q V T L R C S P B26 B27 B28 B29 B37 B38 B39 B40 K Q G H D T V S B41 B42 B43 B44 B45 B46 B47 B48 W Y Q Q A L G Q B49 B50 B51 B52 B53 B54 B55 B56 G P Q F I F Q Y B57 B58 B63 B64 B65 B66 B67 B68 Y E E E E R Q R B69 B70 B71 B72 B74 B75 B76 B77 G N F P D R F S B78 B79 B80 B81 B83 B84 B85 B86 G H Q F P N Y S B87 B88 B89 B90 B91 B92 B93 B94 S E L N V N A L B95 B96 B97 B98 B99 B100 B101 B102 L L G D S A L Y B103 B104 B105 B106 B107 B108 B109 B110 L C A S S D T V B113 B114 B115 B116 B117 B118 B119 B120 S Y E Q Y F G P B121 B122 B123 B124 B125 B126 B127 G T R L T V T
VA	D	FASTA file	A2 A3 A4 A5 A6 A7 A8 A9 K E V E Q N S G A10 A11 A12 A13 A14 A15 A16 A17 P L S V P E G A A18 A19 A20 A21 A22 A23 A24 A25 I A S L N C T Y A26 A27 A28 A29 A36 A37 A38 A39 S D R G S Q S F A40 A41 A42 A43 A44 A45 A46 A47 F W Y R Q Y S G A48 A49 A50 A51 A52 A53 A54 A55 K S P E L I M F A56 A57 A58 A63 A64 A65 A66 A67 I Y S N G D K E A68 A74 A75 A76 A77 A78 A79 A80 D G R F T A Q L A81 A82 A83 A84 A85 A86 A87 A88 N K A S Q Y I S A89 A90 A91 A92 A93 A94 A95 A96 L L I R D S K L A97 A98 A99 A100 A101 A102 A103 A104 S D S A T Y L C A105 A106 A107 A108 A109 A110 A113 A114 A V R T N S G Y A115 A116 A117 A118 A119 A120 A121 A122 A L N F G K G T A123 A124 A125 A126 A127 A128 S L L V T P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASSDTVSYEQY	None	11
CDRB2	YYEEEE	None	6
CDRB1	QGHDT	None	5
CDRA3	AVRTNSGYALN	None	11
CDRA2	IYSNGD	None	6
CDRA1	DRGSQS	None	6

Orientation and docking angles:

Angle	Value
BC2	105.02°
BC1	75.52°
BA	-60.22°
AC2	81.31°
AC1	119.71°
dc	15.44Å
Docking angle	51.14°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
5nme_JI	105.68°	76.02°	-61.00°	81.69°	119.86°	15.53Å	1.2
5nmg_JI	105.93°	75.84°	-59.97°	82.23°	119.89°	15.38Å	1.4
5nme_ED	106.95°	76.37°	-60.59°	80.74°	120.38°	15.51Å	2.3
5nmg_ED	107.26°	76.37°	-59.58°	81.55°	120.22°	15.37Å	2.5
7n2q_GE	106.59°	76.10°	-61.16°	78.55°	120.08°	15.80Å	3.4

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
3mo1_BA	109.77°	73.00°	-58.46°	81.03°	119.12°	16.26Å	5.8
1nma_HL	109.88°	72.48°	-61.03°	81.63°	120.29°	16.40Å	5.9
4hxb_HL	109.66°	72.24°	-59.19°	82.14°	119.35°	16.41Å	5.9
1dlf_HL	110.03°	78.05°	-59.13°	79.41°	118.65°	15.73Å	6.1
1dbk_HL	110.44°	73.17°	-62.13°	81.71°	119.85°	16.60Å	6.3

TCR Details:

Item	Info
VB chain	J
VA chain	I
VB IMGT details	TRBV5/TRBJ2
VA IMGT details	TRAV12/TRAJ41
Species	human

Antigen Details:

Item	Info
Antigen Chain	H
Antigen Type	Peptide
Antigen Organism	HUMAN IMMUNODEFICIENCY VIRUS 1
Antigen Sequence	SLYNTIATL
Antigen Length	9

MHC details:

Item	Info
MHC Chain	F | G
MHC Type	MH1
MHC Species	human
MHC IMGT details	HLA-A*0201

Numbered sequence

Chain type	Chain ID	FASTA/Annotation file	IMGT numbered sequence (Framework/CDR)
VB	J	FASTA file	B2 B3 B4 B5 B6 B7 B8 B9 A G V T Q S P T B10 B11 B12 B13 B14 B15 B16 B17 H L I K T R G Q B18 B19 B20 B21 B22 B23 B24 B25 Q V T L R C S P B26 B27 B28 B29 B37 B38 B39 B40 K Q G H D T V S B41 B42 B43 B44 B45 B46 B47 B48 W Y Q Q A L G Q B49 B50 B51 B52 B53 B54 B55 B56 G P Q F I F Q Y B57 B58 B63 B64 B65 B66 B67 B68 Y E E E E R Q R B69 B70 B71 B72 B74 B75 B76 B77 G N F P D R F S B78 B79 B80 B81 B83 B84 B85 B86 G H Q F P N Y S B87 B88 B89 B90 B91 B92 B93 B94 S E L N V N A L B95 B96 B97 B98 B99 B100 B101 B102 L L G D S A L Y B103 B104 B105 B106 B107 B108 B109 B110 L C A S S D T V B113 B114 B115 B116 B117 B118 B119 B120 S Y E Q Y F G P B121 B122 B123 B124 B125 B126 B127 G T R L T V T
VA	I	FASTA file	A2 A3 A4 A5 A6 A7 A8 A9 K E V E Q N S G A10 A11 A12 A13 A14 A15 A16 A17 P L S V P E G A A18 A19 A20 A21 A22 A23 A24 A25 I A S L N C T Y A26 A27 A28 A29 A36 A37 A38 A39 S D R G S Q S F A40 A41 A42 A43 A44 A45 A46 A47 F W Y R Q Y S G A48 A49 A50 A51 A52 A53 A54 A55 K S P E L I M F A56 A57 A58 A63 A64 A65 A66 A67 I Y S N G D K E A68 A74 A75 A76 A77 A78 A79 A80 D G R F T A Q L A81 A82 A83 A84 A85 A86 A87 A88 N K A S Q Y I S A89 A90 A91 A92 A93 A94 A95 A96 L L I R D S K L A97 A98 A99 A100 A101 A102 A103 A104 S D S A T Y L C A105 A106 A107 A108 A109 A110 A113 A114 A V R T N S G Y A115 A116 A117 A118 A119 A120 A121 A122 A L N F G K G T A123 A124 A125 A126 A127 A128 S L L V T P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASSDTVSYEQY	None	11
CDRB2	YYEEEE	None	6
CDRB1	QGHDT	None	5
CDRA3	AVRTNSGYALN	None	11
CDRA2	IYSNGD	None	6
CDRA1	DRGSQS	None	6

Orientation and docking angles:

Angle	Value
BC2	105.95°
BC1	76.00°
BA	-61.13°
AC2	79.92°
AC1	120.15°
dc	15.36Å
Docking angle	53.07°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
5nme_ED	106.95°	76.37°	-60.59°	80.74°	120.38°	15.51Å	1.5
7n2q_GE	106.59°	76.10°	-61.16°	78.55°	120.08°	15.80Å	1.6
5nme_JI	105.68°	76.02°	-61.00°	81.69°	119.86°	15.53Å	1.8
5nmg_ED	107.26°	76.37°	-59.58°	81.55°	120.22°	15.37Å	2.6
5nmg_JI	105.93°	75.84°	-59.97°	82.23°	119.89°	15.38Å	2.6

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
1dlf_HL	110.03°	78.05°	-59.13°	79.41°	118.65°	15.73Å	5.2
1nma_HL	109.88°	72.48°	-61.03°	81.63°	120.29°	16.40Å	5.6
3mo1_BA	109.77°	73.00°	-58.46°	81.03°	119.12°	16.26Å	5.8
1dbk_HL	110.44°	73.17°	-62.13°	81.71°	119.85°	16.60Å	5.8
5f9w_HL	110.50°	73.01°	-61.98°	80.06°	118.29°	16.39Å	5.9