Details for 8i5c

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Structure information

Crystal Structure of a TCR in complex with HLA-A*11:01 Bound to Kras Peptide (Vvgavgvgk)

Item	Info
PDB	8i5c
Organism	MUS MUSCULUS
Method	X-RAY DIFFRACTION
Resolution	3.34Å
Number of TCRs	10

Paired chains information

This PDB has 10 TCR(s).

E / D

TCR Details:

Item	Info
VB chain	E
VA chain	D
VB IMGT details	TRBV13/TRBJ2
VA IMGT details	TRAV7/TRAJ33
Species	mouse

Antigen Details:

Item	Info
Antigen Chain	C
Antigen Type	Peptide
Antigen Organism	HOMO SAPIENS
Antigen Sequence	VVGAVGVGK
Antigen Length	9

MHC details:

Item	Info
MHC Chain	A \| B
MHC Type	MH1
MHC Species	human
MHC IMGT details	HLA-A*1101

Numbered sequence

Chain type

Chain ID

FASTA/Annotation file

IMGT numbered sequence (Framework/CDR)

FASTA file

B1	B2	B3	B4	B5	B6	B7	B8
E	A	A	V	T	Q	S	P
B9	B10	B11	B12	B13	B14	B15	B16
R	N	K	V	A	V	T	G
B17	B18	B19	B20	B21	B22	B23	B24
G	K	V	T	L	S	C	N
B25	B26	B27	B28	B29	B37	B38	B39
Q	T	N	N	H	N	N	M
B40	B41	B42	B43	B44	B45	B46	B47
Y	W	Y	R	Q	D	T	G
B48	B49	B50	B51	B52	B53	B54	B55
H	G	L	R	L	I	H	Y
B56	B57	B58	B63	B64	B65	B66	B67
S	Y	G	A	G	S	T	E
B68	B69	B70	B71	B72	B74	B75	B76
K	G	D	I	P	D	G	Y
B77	B78	B79	B80	B81	B83	B84	B85
K	A	S	R	P	S	Q	E
B86	B87	B88	B89	B90	B91	B92	B93
N	F	S	L	I	L	E	L
B94	B95	B96	B97	B98	B99	B100	B101
A	T	P	S	Q	T	S	V
B102	B103	B104	B105	B106	B107	B108	B109
Y	F	C	A	S	G	D	T
B110	B113	B114	B115	B116	B117	B118	B119
G	G	Y	E	Q	Y	F	G
B120	B121	B122	B123	B124	B125	B126	B127
P	G	T	R	L	T	V	L

FASTA file

A1	A2	A3	A4	A5	A6	A7	A8
Q	Q	K	V	Q	Q	S	P
A9	A10	A11	A12	A13	A14	A15	A16
E	S	L	I	V	P	E	G
A17	A18	A19	A20	A21	A22	A23	A24
G	M	A	S	L	N	C	T
A25	A26	A27	A28	A29	A36	A37	A38
S	S	D	R	N	V	D	Y
A39	A40	A41	A42	A43	A44	A45	A46
F	W	W	Y	R	Q	H	S
A47	A48	A49	A50	A51	A52	A53	A54
G	K	S	P	K	M	L	M
A55	A56	A57	A58	A63	A64	A65	A66
S	I	F	S	N	G	E	K
A67	A68	A74	A75	A76	A77	A78	A79
E	E	G	R	F	T	V	H
A80	A81	A82	A83	A84	A85	A86	A87
L	N	K	A	S	L	H	T
A88	A89	A90	A91	A92	A93	A94	A95
S	L	H	I	R	D	S	Q
A96	A97	A98	A99	A100	A101	A102	A103
P	S	D	S	A	L	Y	L
A104	A105	A106	A107	A108	A109	A113	A114
C	A	A	R	D	S	N	Y
A115	A116	A117	A118	A119	A120	A121	A122
Q	L	I	W	G	S	G	T
A123	A124	A125	A126	A127	A128
K	L	I	I	K	P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASGDTGGYEQY	None	11
CDRB2	SYGAGS	None	6
CDRB1	NNHNN	None	5
CDRA3	AARDSNYQLI	None	10
CDRA2	IFSNGE	None	6
CDRA1	DRNVDY	None	6

Orientation and docking angles:

Angle	Value
BC2	106.34°
BC1	73.41°
BA	-61.79°
AC2	78.05°
AC1	123.49°
dc	16.53Å
Docking angle	48.34°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
4g8e_BA	106.67°	72.72°	-60.52°	77.51°	123.85°	16.52Å	1.6
4x6c_FE	105.64°	72.65°	-62.07°	76.83°	123.03°	16.49Å	1.7
5e9d_JI	105.66°	74.72°	-62.56°	77.24°	123.77°	16.37Å	1.9
4pj7_FE	104.93°	73.02°	-62.94°	79.01°	123.61°	16.69Å	2.1
4g8f_BA	106.37°	71.74°	-62.87°	78.56°	124.53°	16.77Å	2.3

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
1nmc_HL	110.09°	71.80°	-64.06°	80.19°	120.88°	16.16Å	5.8
1nma_HL	109.88°	72.48°	-61.03°	81.63°	120.29°	16.40Å	6.1
1n4x_HL	110.31°	76.00°	-65.51°	77.43°	122.43°	15.84Å	6.2
4yfl_FI	106.92°	71.36°	-64.48°	73.60°	120.95°	15.85Å	6.2
2vxu_IM	110.96°	71.68°	-62.78°	78.60°	119.89°	16.17Å	6.2

J / I

TCR Details:

Item	Info
VB chain	J
VA chain	I
VB IMGT details	TRBV13/TRBJ2
VA IMGT details	TRAV7/TRAJ33
Species	mouse

Antigen Details:

Item	Info
Antigen Chain	H
Antigen Type	Peptide
Antigen Organism	HOMO SAPIENS
Antigen Sequence	VVGAVGVGK
Antigen Length	9

MHC details:

Item	Info
MHC Chain	F \| G
MHC Type	MH1
MHC Species	human
MHC IMGT details	HLA-A*1101

Numbered sequence

Chain type

Chain ID

FASTA/Annotation file

IMGT numbered sequence (Framework/CDR)

FASTA file

B1	B2	B3	B4	B5	B6	B7	B8
E	A	A	V	T	Q	S	P
B9	B10	B11	B12	B13	B14	B15	B16
R	N	K	V	A	V	T	G
B17	B18	B19	B20	B21	B22	B23	B24
G	K	V	T	L	S	C	N
B25	B26	B27	B28	B29	B37	B38	B39
Q	T	N	N	H	N	N	M
B40	B41	B42	B43	B44	B45	B46	B47
Y	W	Y	R	Q	D	T	G
B48	B49	B50	B51	B52	B53	B54	B55
H	G	L	R	L	I	H	Y
B56	B57	B58	B63	B64	B65	B66	B67
S	Y	G	A	G	S	T	E
B68	B69	B70	B71	B72	B74	B75	B76
K	G	D	I	P	D	G	Y
B77	B78	B79	B80	B81	B83	B84	B85
K	A	S	R	P	S	Q	E
B86	B87	B88	B89	B90	B91	B92	B93
N	F	S	L	I	L	E	L
B94	B95	B96	B97	B98	B99	B100	B101
A	T	P	S	Q	T	S	V
B102	B103	B104	B105	B106	B107	B108	B109
Y	F	C	A	S	G	D	T
B110	B113	B114	B115	B116	B117	B118	B119
G	G	Y	E	Q	Y	F	G
B120	B121	B122	B123	B124	B125	B126	B127
P	G	T	R	L	T	V	L

FASTA file

A1	A2	A3	A4	A5	A6	A7	A8
Q	Q	K	V	Q	Q	S	P
A9	A10	A11	A12	A13	A14	A15	A16
E	S	L	I	V	P	E	G
A17	A18	A19	A20	A21	A22	A23	A24
G	M	A	S	L	N	C	T
A25	A26	A27	A28	A29	A36	A37	A38
S	S	D	R	N	V	D	Y
A39	A40	A41	A42	A43	A44	A45	A46
F	W	W	Y	R	Q	H	S
A47	A48	A49	A50	A51	A52	A53	A54
G	K	S	P	K	M	L	M
A55	A56	A57	A58	A63	A64	A65	A66
S	I	F	S	N	G	E	K
A67	A68	A74	A75	A76	A77	A78	A79
E	E	G	R	F	T	V	H
A80	A81	A82	A83	A84	A85	A86	A87
L	N	K	A	S	L	H	T
A88	A89	A90	A91	A92	A93	A94	A95
S	L	H	I	R	D	S	Q
A96	A97	A98	A99	A100	A101	A102	A103
P	S	D	S	A	L	Y	L
A104	A105	A106	A107	A108	A109	A113	A114
C	A	A	R	D	S	N	Y
A115	A116	A117	A118	A119	A120	A121	A122
Q	L	I	W	G	S	G	T
A123	A124	A125	A126	A127	A128
K	L	I	I	K	P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASGDTGGYEQY	None	11
CDRB2	SYGAGS	None	6
CDRB1	NNHNN	None	5
CDRA3	AARDSNYQLI	None	10
CDRA2	IFSNGE	None	6
CDRA1	DRNVDY	None	6

Orientation and docking angles:

Angle	Value
BC2	105.80°
BC1	73.04°
BA	-62.22°
AC2	78.09°
AC1	123.79°
dc	16.56Å
Docking angle	47.86°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
4x6c_FE	105.64°	72.65°	-62.07°	76.83°	123.03°	16.49Å	1.5
4pj7_FE	104.93°	73.02°	-62.94°	79.01°	123.61°	16.69Å	1.5
4pjx_HG	104.62°	73.12°	-62.91°	78.97°	123.27°	16.44Å	1.7
4g8f_BA	106.37°	71.74°	-62.87°	78.56°	124.53°	16.77Å	1.8
5e9d_JI	105.66°	74.72°	-62.56°	77.24°	123.77°	16.37Å	1.9

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
1nmc_HL	110.09°	71.80°	-64.06°	80.19°	120.88°	16.16Å	6.0
4yfl_FI	106.92°	71.36°	-64.48°	73.60°	120.95°	15.85Å	6.2
1n4x_HL	110.31°	76.00°	-65.51°	77.43°	122.43°	15.84Å	6.5
1nma_HL	109.88°	72.48°	-61.03°	81.63°	120.29°	16.40Å	6.6
1ghf_HL	110.63°	71.68°	-61.52°	81.98°	122.12°	16.05Å	6.6

O / N

TCR Details:

Item	Info
VB chain	O
VA chain	N
VB IMGT details	TRBV13/TRBJ2
VA IMGT details	TRAV7/TRAJ33
Species	mouse

Antigen Details:

Item	Info
Antigen Chain	M
Antigen Type	Peptide
Antigen Organism	HOMO SAPIENS
Antigen Sequence	VVGAVGVGK
Antigen Length	9

MHC details:

Item	Info
MHC Chain	K \| L
MHC Type	MH1
MHC Species	human
MHC IMGT details	HLA-A*1101

Numbered sequence

Chain type

Chain ID

FASTA/Annotation file

IMGT numbered sequence (Framework/CDR)

FASTA file

B1	B2	B3	B4	B5	B6	B7	B8
E	A	A	V	T	Q	S	P
B9	B10	B11	B12	B13	B14	B15	B16
R	N	K	V	A	V	T	G
B17	B18	B19	B20	B21	B22	B23	B24
G	K	V	T	L	S	C	N
B25	B26	B27	B28	B29	B37	B38	B39
Q	T	N	N	H	N	N	M
B40	B41	B42	B43	B44	B45	B46	B47
Y	W	Y	R	Q	D	T	G
B48	B49	B50	B51	B52	B53	B54	B55
H	G	L	R	L	I	H	Y
B56	B57	B58	B63	B64	B65	B66	B67
S	Y	G	A	G	S	T	E
B68	B69	B70	B71	B72	B74	B75	B76
K	G	D	I	P	D	G	Y
B77	B78	B79	B80	B81	B83	B84	B85
K	A	S	R	P	S	Q	E
B86	B87	B88	B89	B90	B91	B92	B93
N	F	S	L	I	L	E	L
B94	B95	B96	B97	B98	B99	B100	B101
A	T	P	S	Q	T	S	V
B102	B103	B104	B105	B106	B107	B108	B109
Y	F	C	A	S	G	D	T
B110	B113	B114	B115	B116	B117	B118	B119
G	G	Y	E	Q	Y	F	G
B120	B121	B122	B123	B124	B125	B126	B127
P	G	T	R	L	T	V	L

FASTA file

A1	A2	A3	A4	A5	A6	A7	A8
Q	Q	K	V	Q	Q	S	P
A9	A10	A11	A12	A13	A14	A15	A16
E	S	L	I	V	P	E	G
A17	A18	A19	A20	A21	A22	A23	A24
G	M	A	S	L	N	C	T
A25	A26	A27	A28	A29	A36	A37	A38
S	S	D	R	N	V	D	Y
A39	A40	A41	A42	A43	A44	A45	A46
F	W	W	Y	R	Q	H	S
A47	A48	A49	A50	A51	A52	A53	A54
G	K	S	P	K	M	L	M
A55	A56	A57	A58	A63	A64	A65	A66
S	I	F	S	N	G	E	K
A67	A68	A74	A75	A76	A77	A78	A79
E	E	G	R	F	T	V	H
A80	A81	A82	A83	A84	A85	A86	A87
L	N	K	A	S	L	H	T
A88	A89	A90	A91	A92	A93	A94	A95
S	L	H	I	R	D	S	Q
A96	A97	A98	A99	A100	A101	A102	A103
P	S	D	S	A	L	Y	L
A104	A105	A106	A107	A108	A109	A113	A114
C	A	A	R	D	S	N	Y
A115	A116	A117	A118	A119	A120	A121	A122
Q	L	I	W	G	S	G	T
A123	A124	A125	A126	A127	A128
K	L	I	I	K	P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASGDTGGYEQY	None	11
CDRB2	SYGAGS	None	6
CDRB1	NNHNN	None	5
CDRA3	AARDSNYQLI	None	10
CDRA2	IFSNGE	None	6
CDRA1	DRNVDY	None	6

Orientation and docking angles:

Angle	Value
BC2	106.07°
BC1	73.01°
BA	-62.27°
AC2	78.18°
AC1	123.80°
dc	16.59Å
Docking angle	48.32°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
4pj7_FE	104.93°	73.02°	-62.94°	79.01°	123.61°	16.69Å	1.6
4x6c_FE	105.64°	72.65°	-62.07°	76.83°	123.03°	16.49Å	1.7
4g8f_BA	106.37°	71.74°	-62.87°	78.56°	124.53°	16.77Å	1.7
4pjx_HG	104.62°	73.12°	-62.91°	78.97°	123.27°	16.44Å	1.9
4g8e_BA	106.67°	72.72°	-60.52°	77.51°	123.85°	16.52Å	2.0

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
1nmc_HL	110.09°	71.80°	-64.06°	80.19°	120.88°	16.16Å	5.8
4yfl_FI	106.92°	71.36°	-64.48°	73.60°	120.95°	15.85Å	6.2
1n4x_HL	110.31°	76.00°	-65.51°	77.43°	122.43°	15.84Å	6.4
1nma_HL	109.88°	72.48°	-61.03°	81.63°	120.29°	16.40Å	6.4
1ghf_HL	110.63°	71.68°	-61.52°	81.98°	122.12°	16.05Å	6.4

T / S

TCR Details:

Item	Info
VB chain	T
VA chain	S
VB IMGT details	TRBV13/TRBJ2
VA IMGT details	TRAV7/TRAJ33
Species	mouse

Antigen Details:

Item	Info
Antigen Chain	R
Antigen Type	Peptide
Antigen Organism	HOMO SAPIENS
Antigen Sequence	VVGAVGVGK
Antigen Length	9

MHC details:

Item	Info
MHC Chain	P \| Q
MHC Type	MH1
MHC Species	human
MHC IMGT details	HLA-A*1101

Numbered sequence

Chain type

Chain ID

FASTA/Annotation file

IMGT numbered sequence (Framework/CDR)

FASTA file

B1	B2	B3	B4	B5	B6	B7	B8
E	A	A	V	T	Q	S	P
B9	B10	B11	B12	B13	B14	B15	B16
R	N	K	V	A	V	T	G
B17	B18	B19	B20	B21	B22	B23	B24
G	K	V	T	L	S	C	N
B25	B26	B27	B28	B29	B37	B38	B39
Q	T	N	N	H	N	N	M
B40	B41	B42	B43	B44	B45	B46	B47
Y	W	Y	R	Q	D	T	G
B48	B49	B50	B51	B52	B53	B54	B55
H	G	L	R	L	I	H	Y
B56	B57	B58	B63	B64	B65	B66	B67
S	Y	G	A	G	S	T	E
B68	B69	B70	B71	B72	B74	B75	B76
K	G	D	I	P	D	G	Y
B77	B78	B79	B80	B81	B83	B84	B85
K	A	S	R	P	S	Q	E
B86	B87	B88	B89	B90	B91	B92	B93
N	F	S	L	I	L	E	L
B94	B95	B96	B97	B98	B99	B100	B101
A	T	P	S	Q	T	S	V
B102	B103	B104	B105	B106	B107	B108	B109
Y	F	C	A	S	G	D	T
B110	B113	B114	B115	B116	B117	B118	B119
G	G	Y	E	Q	Y	F	G
B120	B121	B122	B123	B124	B125	B126	B127
P	G	T	R	L	T	V	L

FASTA file

A1	A2	A3	A4	A5	A6	A7	A8
Q	Q	K	V	Q	Q	S	P
A9	A10	A11	A12	A13	A14	A15	A16
E	S	L	I	V	P	E	G
A17	A18	A19	A20	A21	A22	A23	A24
G	M	A	S	L	N	C	T
A25	A26	A27	A28	A29	A36	A37	A38
S	S	D	R	N	V	D	Y
A39	A40	A41	A42	A43	A44	A45	A46
F	W	W	Y	R	Q	H	S
A47	A48	A49	A50	A51	A52	A53	A54
G	K	S	P	K	M	L	M
A55	A56	A57	A58	A63	A64	A65	A66
S	I	F	S	N	G	E	K
A67	A68	A74	A75	A76	A77	A78	A79
E	E	G	R	F	T	V	H
A80	A81	A82	A83	A84	A85	A86	A87
L	N	K	A	S	L	H	T
A88	A89	A90	A91	A92	A93	A94	A95
S	L	H	I	R	D	S	Q
A96	A97	A98	A99	A100	A101	A102	A103
P	S	D	S	A	L	Y	L
A104	A105	A106	A107	A108	A109	A113	A114
C	A	A	R	D	S	N	Y
A115	A116	A117	A118	A119	A120	A121	A122
Q	L	I	W	G	S	G	T
A123	A124	A125	A126	A127	A128
K	L	I	I	K	P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASGDTGGYEQY	None	11
CDRB2	SYGAGS	None	6
CDRB1	NNHNN	None	5
CDRA3	AARDSNYQLI	None	10
CDRA2	IFSNGE	None	6
CDRA1	DRNVDY	None	6

Orientation and docking angles:

Angle	Value
BC2	106.08°
BC1	73.18°
BA	-62.04°
AC2	77.86°
AC1	123.65°
dc	16.53Å
Docking angle	47.88°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
4x6c_FE	105.64°	72.65°	-62.07°	76.83°	123.03°	16.49Å	1.4
4g8e_BA	106.67°	72.72°	-60.52°	77.51°	123.85°	16.52Å	1.7
5e9d_JI	105.66°	74.72°	-62.56°	77.24°	123.77°	16.37Å	1.8
4pj7_FE	104.93°	73.02°	-62.94°	79.01°	123.61°	16.69Å	1.9
4g8f_BA	106.37°	71.74°	-62.87°	78.56°	124.53°	16.77Å	2.0

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
1nmc_HL	110.09°	71.80°	-64.06°	80.19°	120.88°	16.16Å	5.9
4yfl_FI	106.92°	71.36°	-64.48°	73.60°	120.95°	15.85Å	6.0
1n4x_HL	110.31°	76.00°	-65.51°	77.43°	122.43°	15.84Å	6.3
2vxu_IM	110.96°	71.68°	-62.78°	78.60°	119.89°	16.17Å	6.4
1nma_HL	109.88°	72.48°	-61.03°	81.63°	120.29°	16.40Å	6.4

Y / X

TCR Details:

Item	Info
VB chain	Y
VA chain	X
VB IMGT details	TRBV13/TRBJ2
VA IMGT details	TRAV7/TRAJ33
Species	mouse

Antigen Details:

Item	Info
Antigen Chain	W
Antigen Type	Peptide
Antigen Organism	HOMO SAPIENS
Antigen Sequence	VVGAVGVGK
Antigen Length	9

MHC details:

Item	Info
MHC Chain	U \| V
MHC Type	MH1
MHC Species	human
MHC IMGT details	HLA-A*1101

Numbered sequence

Chain type

Chain ID

FASTA/Annotation file

IMGT numbered sequence (Framework/CDR)

FASTA file

B1	B2	B3	B4	B5	B6	B7	B8
E	A	A	V	T	Q	S	P
B9	B10	B11	B12	B13	B14	B15	B16
R	N	K	V	A	V	T	G
B17	B18	B19	B20	B21	B22	B23	B24
G	K	V	T	L	S	C	N
B25	B26	B27	B28	B29	B37	B38	B39
Q	T	N	N	H	N	N	M
B40	B41	B42	B43	B44	B45	B46	B47
Y	W	Y	R	Q	D	T	G
B48	B49	B50	B51	B52	B53	B54	B55
H	G	L	R	L	I	H	Y
B56	B57	B58	B63	B64	B65	B66	B67
S	Y	G	A	G	S	T	E
B68	B69	B70	B71	B72	B74	B75	B76
K	G	D	I	P	D	G	Y
B77	B78	B79	B80	B81	B83	B84	B85
K	A	S	R	P	S	Q	E
B86	B87	B88	B89	B90	B91	B92	B93
N	F	S	L	I	L	E	L
B94	B95	B96	B97	B98	B99	B100	B101
A	T	P	S	Q	T	S	V
B102	B103	B104	B105	B106	B107	B108	B109
Y	F	C	A	S	G	D	T
B110	B113	B114	B115	B116	B117	B118	B119
G	G	Y	E	Q	Y	F	G
B120	B121	B122	B123	B124	B125	B126	B127
P	G	T	R	L	T	V	L

FASTA file

A1	A2	A3	A4	A5	A6	A7	A8
Q	Q	K	V	Q	Q	S	P
A9	A10	A11	A12	A13	A14	A15	A16
E	S	L	I	V	P	E	G
A17	A18	A19	A20	A21	A22	A23	A24
G	M	A	S	L	N	C	T
A25	A26	A27	A28	A29	A36	A37	A38
S	S	D	R	N	V	D	Y
A39	A40	A41	A42	A43	A44	A45	A46
F	W	W	Y	R	Q	H	S
A47	A48	A49	A50	A51	A52	A53	A54
G	K	S	P	K	M	L	M
A55	A56	A57	A58	A63	A64	A65	A66
S	I	F	S	N	G	E	K
A67	A68	A74	A75	A76	A77	A78	A79
E	E	G	R	F	T	V	H
A80	A81	A82	A83	A84	A85	A86	A87
L	N	K	A	S	L	H	T
A88	A89	A90	A91	A92	A93	A94	A95
S	L	H	I	R	D	S	Q
A96	A97	A98	A99	A100	A101	A102	A103
P	S	D	S	A	L	Y	L
A104	A105	A106	A107	A108	A109	A113	A114
C	A	A	R	D	S	N	Y
A115	A116	A117	A118	A119	A120	A121	A122
Q	L	I	W	G	S	G	T
A123	A124	A125	A126	A127	A128
K	L	I	I	K	P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASGDTGGYEQY	None	11
CDRB2	SYGAGS	None	6
CDRB1	NNHNN	None	5
CDRA3	AARDSNYQLI	None	10
CDRA2	IFSNGE	None	6
CDRA1	DRNVDY	None	6

Orientation and docking angles:

Angle	Value
BC2	106.49°
BC1	73.15°
BA	-60.25°
AC2	78.11°
AC1	124.04°
dc	16.56Å
Docking angle	47.77°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
4g8e_BA	106.67°	72.72°	-60.52°	77.51°	123.85°	16.52Å	0.8
8dnt_IH	107.67°	72.60°	-59.28°	77.90°	124.75°	16.64Å	1.8
8dnt_PM	107.67°	71.80°	-59.96°	78.60°	124.64°	16.70Å	2.0
7na5_ED	107.65°	72.03°	-60.43°	77.41°	125.33°	16.45Å	2.2
4y1a_ED	106.20°	71.83°	-60.17°	79.83°	124.12°	16.73Å	2.2

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
4x4x_CD	112.33°	72.96°	-60.80°	78.66°	125.88°	15.67Å	6.2
1nma_HL	109.88°	72.48°	-61.03°	81.63°	120.29°	16.40Å	6.2
1ghf_HL	110.63°	71.68°	-61.52°	81.98°	122.12°	16.05Å	6.3
1nmc_HL	110.09°	71.80°	-64.06°	80.19°	120.88°	16.16Å	6.6
2vxu_IM	110.96°	71.68°	-62.78°	78.60°	119.89°	16.17Å	6.8

d / c

TCR Details:

Item	Info
VB chain	d
VA chain	c
VB IMGT details	TRBV13/TRBJ2
VA IMGT details	TRAV7/TRAJ33
Species	mouse

Antigen Details:

Item	Info
Antigen Chain	b
Antigen Type	Peptide
Antigen Organism	HOMO SAPIENS
Antigen Sequence	VVGAVGVGK
Antigen Length	9

MHC details:

Item	Info
MHC Chain	Z \| a
MHC Type	MH1
MHC Species	human
MHC IMGT details	HLA-A*1101

Numbered sequence

Chain type

Chain ID

FASTA/Annotation file

IMGT numbered sequence (Framework/CDR)

FASTA file

B1	B2	B3	B4	B5	B6	B7	B8
E	A	A	V	T	Q	S	P
B9	B10	B11	B12	B13	B14	B15	B16
R	N	K	V	A	V	T	G
B17	B18	B19	B20	B21	B22	B23	B24
G	K	V	T	L	S	C	N
B25	B26	B27	B28	B29	B37	B38	B39
Q	T	N	N	H	N	N	M
B40	B41	B42	B43	B44	B45	B46	B47
Y	W	Y	R	Q	D	T	G
B48	B49	B50	B51	B52	B53	B54	B55
H	G	L	R	L	I	H	Y
B56	B57	B58	B63	B64	B65	B66	B67
S	Y	G	A	G	S	T	E
B68	B69	B70	B71	B72	B74	B75	B76
K	G	D	I	P	D	G	Y
B77	B78	B79	B80	B81	B83	B84	B85
K	A	S	R	P	S	Q	E
B86	B87	B88	B89	B90	B91	B92	B93
N	F	S	L	I	L	E	L
B94	B95	B96	B97	B98	B99	B100	B101
A	T	P	S	Q	T	S	V
B102	B103	B104	B105	B106	B107	B108	B109
Y	F	C	A	S	G	D	T
B110	B113	B114	B115	B116	B117	B118	B119
G	G	Y	E	Q	Y	F	G
B120	B121	B122	B123	B124	B125	B126	B127
P	G	T	R	L	T	V	L

FASTA file

A1	A2	A3	A4	A5	A6	A7	A8
Q	Q	K	V	Q	Q	S	P
A9	A10	A11	A12	A13	A14	A15	A16
E	S	L	I	V	P	E	G
A17	A18	A19	A20	A21	A22	A23	A24
G	M	A	S	L	N	C	T
A25	A26	A27	A28	A29	A36	A37	A38
S	S	D	R	N	V	D	Y
A39	A40	A41	A42	A43	A44	A45	A46
F	W	W	Y	R	Q	H	S
A47	A48	A49	A50	A51	A52	A53	A54
G	K	S	P	K	M	L	M
A55	A56	A57	A58	A63	A64	A65	A66
S	I	F	S	N	G	E	K
A67	A68	A74	A75	A76	A77	A78	A79
E	E	G	R	F	T	V	H
A80	A81	A82	A83	A84	A85	A86	A87
L	N	K	A	S	L	H	T
A88	A89	A90	A91	A92	A93	A94	A95
S	L	H	I	R	D	S	Q
A96	A97	A98	A99	A100	A101	A102	A103
P	S	D	S	A	L	Y	L
A104	A105	A106	A107	A108	A109	A113	A114
C	A	A	R	D	S	N	Y
A115	A116	A117	A118	A119	A120	A121	A122
Q	L	I	W	G	S	G	T
A123	A124	A125	A126	A127	A128
K	L	I	I	K	P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASGDTGGYEQY	None	11
CDRB2	SYGAGS	None	6
CDRB1	NNHNN	None	5
CDRA3	AARDSNYQLI	None	10
CDRA2	IFSNGE	None	6
CDRA1	DRNVDY	None	6

Orientation and docking angles:

Angle	Value
BC2	104.95°
BC1	73.49°
BA	-60.88°
AC2	78.46°
AC1	123.53°
dc	16.51Å
Docking angle	47.59°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
5ks9_HG	103.96°	73.13°	-60.30°	79.64°	123.33°	15.94Å	1.8
7rm4_IJ	104.11°	74.07°	-60.18°	78.44°	122.39°	16.02Å	1.8
5ks9_FE	104.05°	73.02°	-60.27°	79.68°	123.11°	15.88Å	1.9
7rm4_DE	103.90°	73.60°	-60.63°	78.47°	122.02°	16.02Å	1.9
5d7i_HG	104.30°	72.61°	-60.75°	80.03°	123.42°	16.67Å	1.9

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
1nma_HL	109.88°	72.48°	-61.03°	81.63°	120.29°	16.40Å	6.8
1nmc_HL	110.09°	71.80°	-64.06°	80.19°	120.88°	16.16Å	7.0
1ghf_HL	110.63°	71.68°	-61.52°	81.98°	122.12°	16.05Å	7.1
4yfl_FI	106.92°	71.36°	-64.48°	73.60°	120.95°	15.85Å	7.2
4dcq_BA	108.30°	73.42°	-64.76°	82.94°	120.98°	16.23Å	7.3

i / h

TCR Details:

Item	Info
VB chain	i
VA chain	h
VB IMGT details	TRBV13/TRBJ2
VA IMGT details	TRAV7/TRAJ33
Species	mouse

Antigen Details:

Item	Info
Antigen Chain	g
Antigen Type	Peptide
Antigen Organism	HOMO SAPIENS
Antigen Sequence	VVGAVGVGK
Antigen Length	9

MHC details:

Item	Info
MHC Chain	e \| f
MHC Type	MH1
MHC Species	human
MHC IMGT details	HLA-A*1101

Numbered sequence

Chain type

Chain ID

FASTA/Annotation file

IMGT numbered sequence (Framework/CDR)

FASTA file

B1	B2	B3	B4	B5	B6	B7	B8
E	A	A	V	T	Q	S	P
B9	B10	B11	B12	B13	B14	B15	B16
R	N	K	V	A	V	T	G
B17	B18	B19	B20	B21	B22	B23	B24
G	K	V	T	L	S	C	N
B25	B26	B27	B28	B29	B37	B38	B39
Q	T	N	N	H	N	N	M
B40	B41	B42	B43	B44	B45	B46	B47
Y	W	Y	R	Q	D	T	G
B48	B49	B50	B51	B52	B53	B54	B55
H	G	L	R	L	I	H	Y
B56	B57	B58	B63	B64	B65	B66	B67
S	Y	G	A	G	S	T	E
B68	B69	B70	B71	B72	B74	B75	B76
K	G	D	I	P	D	G	Y
B77	B78	B79	B80	B81	B83	B84	B85
K	A	S	R	P	S	Q	E
B86	B87	B88	B89	B90	B91	B92	B93
N	F	S	L	I	L	E	L
B94	B95	B96	B97	B98	B99	B100	B101
A	T	P	S	Q	T	S	V
B102	B103	B104	B105	B106	B107	B108	B109
Y	F	C	A	S	G	D	T
B110	B113	B114	B115	B116	B117	B118	B119
G	G	Y	E	Q	Y	F	G
B120	B121	B122	B123	B124	B125	B126	B127
P	G	T	R	L	T	V	L

FASTA file

A1	A2	A3	A4	A5	A6	A7	A8
Q	Q	K	V	Q	Q	S	P
A9	A10	A11	A12	A13	A14	A15	A16
E	S	L	I	V	P	E	G
A17	A18	A19	A20	A21	A22	A23	A24
G	M	A	S	L	N	C	T
A25	A26	A27	A28	A29	A36	A37	A38
S	S	D	R	N	V	D	Y
A39	A40	A41	A42	A43	A44	A45	A46
F	W	W	Y	R	Q	H	S
A47	A48	A49	A50	A51	A52	A53	A54
G	K	S	P	K	M	L	M
A55	A56	A57	A58	A63	A64	A65	A66
S	I	F	S	N	G	E	K
A67	A68	A74	A75	A76	A77	A78	A79
E	E	G	R	F	T	V	H
A80	A81	A82	A83	A84	A85	A86	A87
L	N	K	A	S	L	H	T
A88	A89	A90	A91	A92	A93	A94	A95
S	L	H	I	R	D	S	Q
A96	A97	A98	A99	A100	A101	A102	A103
P	S	D	S	A	L	Y	L
A104	A105	A106	A107	A108	A109	A113	A114
C	A	A	R	D	S	N	Y
A115	A116	A117	A118	A119	A120	A121	A122
Q	L	I	W	G	S	G	T
A123	A124	A125	A126	A127	A128
K	L	I	I	K	P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASGDTGGYEQY	None	11
CDRB2	SYGAGS	None	6
CDRB1	NNHNN	None	5
CDRA3	AARDSNYQLI	None	10
CDRA2	IFSNGE	None	6
CDRA1	DRNVDY	None	6

Orientation and docking angles:

Angle	Value
BC2	105.31°
BC1	73.72°
BA	-61.21°
AC2	78.32°
AC1	123.59°
dc	16.43Å
Docking angle	47.63°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
4g8e_BA	106.67°	72.72°	-60.52°	77.51°	123.85°	16.52Å	2.0
4pj7_FE	104.93°	73.02°	-62.94°	79.01°	123.61°	16.69Å	2.0
5e9d_JI	105.66°	74.72°	-62.56°	77.24°	123.77°	16.37Å	2.0
4x6c_FE	105.64°	72.65°	-62.07°	76.83°	123.03°	16.49Å	2.1
4grm_BA	104.75°	74.22°	-61.93°	76.60°	123.01°	16.23Å	2.1

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
1nma_HL	109.88°	72.48°	-61.03°	81.63°	120.29°	16.40Å	6.7
1nmc_HL	110.09°	71.80°	-64.06°	80.19°	120.88°	16.16Å	6.8
1ghf_HL	110.63°	71.68°	-61.52°	81.98°	122.12°	16.05Å	6.9
4yfl_FI	106.92°	71.36°	-64.48°	73.60°	120.95°	15.85Å	7.0
4dcq_BA	108.30°	73.42°	-64.76°	82.94°	120.98°	16.23Å	7.1

n / m

TCR Details:

Item	Info
VB chain	n
VA chain	m
VB IMGT details	TRBV13/TRBJ2
VA IMGT details	TRAV7/TRAJ33
Species	mouse

Antigen Details:

Item	Info
Antigen Chain	l
Antigen Type	Peptide
Antigen Organism	HOMO SAPIENS
Antigen Sequence	VVGAVGVGK
Antigen Length	9

MHC details:

Item	Info
MHC Chain	j \| k
MHC Type	MH1
MHC Species	human
MHC IMGT details	HLA-A*1101

Numbered sequence

Chain type

Chain ID

FASTA/Annotation file

IMGT numbered sequence (Framework/CDR)

FASTA file

B1	B2	B3	B4	B5	B6	B7	B8
E	A	A	V	T	Q	S	P
B9	B10	B11	B12	B13	B14	B15	B16
R	N	K	V	A	V	T	G
B17	B18	B19	B20	B21	B22	B23	B24
G	K	V	T	L	S	C	N
B25	B26	B27	B28	B29	B37	B38	B39
Q	T	N	N	H	N	N	M
B40	B41	B42	B43	B44	B45	B46	B47
Y	W	Y	R	Q	D	T	G
B48	B49	B50	B51	B52	B53	B54	B55
H	G	L	R	L	I	H	Y
B56	B57	B58	B63	B64	B65	B66	B67
S	Y	G	A	G	S	T	E
B68	B69	B70	B71	B72	B74	B75	B76
K	G	D	I	P	D	G	Y
B77	B78	B79	B80	B81	B83	B84	B85
K	A	S	R	P	S	Q	E
B86	B87	B88	B89	B90	B91	B92	B93
N	F	S	L	I	L	E	L
B94	B95	B96	B97	B98	B99	B100	B101
A	T	P	S	Q	T	S	V
B102	B103	B104	B105	B106	B107	B108	B109
Y	F	C	A	S	G	D	T
B110	B113	B114	B115	B116	B117	B118	B119
G	G	Y	E	Q	Y	F	G
B120	B121	B122	B123	B124	B125	B126	B127
P	G	T	R	L	T	V	L

FASTA file

A1	A2	A3	A4	A5	A6	A7	A8
Q	Q	K	V	Q	Q	S	P
A9	A10	A11	A12	A13	A14	A15	A16
E	S	L	I	V	P	E	G
A17	A18	A19	A20	A21	A22	A23	A24
G	M	A	S	L	N	C	T
A25	A26	A27	A28	A29	A36	A37	A38
S	S	D	R	N	V	D	Y
A39	A40	A41	A42	A43	A44	A45	A46
F	W	W	Y	R	Q	H	S
A47	A48	A49	A50	A51	A52	A53	A54
G	K	S	P	K	M	L	M
A55	A56	A57	A58	A63	A64	A65	A66
S	I	F	S	N	G	E	K
A67	A68	A74	A75	A76	A77	A78	A79
E	E	G	R	F	T	V	H
A80	A81	A82	A83	A84	A85	A86	A87
L	N	K	A	S	L	H	T
A88	A89	A90	A91	A92	A93	A94	A95
S	L	H	I	R	D	S	Q
A96	A97	A98	A99	A100	A101	A102	A103
P	S	D	S	A	L	Y	L
A104	A105	A106	A107	A108	A109	A113	A114
C	A	A	R	D	S	N	Y
A115	A116	A117	A118	A119	A120	A121	A122
Q	L	I	W	G	S	G	T
A123	A124	A125	A126	A127	A128
K	L	I	I	K	P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASGDTGGYEQY	None	11
CDRB2	SYGAGS	None	6
CDRB1	NNHNN	None	5
CDRA3	AARDSNYQLI	None	10
CDRA2	IFSNGE	None	6
CDRA1	DRNVDY	None	6

Orientation and docking angles:

Angle	Value
BC2	104.21°
BC1	72.97°
BA	-60.48°
AC2	78.59°
AC1	123.50°
dc	16.53Å
Docking angle	46.89°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
5ks9_HG	103.96°	73.13°	-60.30°	79.64°	123.33°	15.94Å	1.3
5ks9_FE	104.05°	73.02°	-60.27°	79.68°	123.11°	15.88Å	1.4
5d7i_HG	104.30°	72.61°	-60.75°	80.03°	123.42°	16.67Å	1.5
4pjc_HG	103.15°	72.48°	-61.53°	78.37°	123.38°	16.57Å	1.6
7rm4_IJ	104.11°	74.07°	-60.18°	78.44°	122.39°	16.02Å	1.7

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
1nma_HL	109.88°	72.48°	-61.03°	81.63°	120.29°	16.40Å	7.2
1ghf_HL	110.63°	71.68°	-61.52°	81.98°	122.12°	16.05Å	7.6
4yfl_FI	106.92°	71.36°	-64.48°	73.60°	120.95°	15.85Å	7.6
1nmc_HL	110.09°	71.80°	-64.06°	80.19°	120.88°	16.16Å	7.6
3mo1_BA	109.77°	73.00°	-58.46°	81.03°	119.12°	16.26Å	7.8

s / r

TCR Details:

Item	Info
VB chain	s
VA chain	r
VB IMGT details	TRBV13/TRBJ2
VA IMGT details	TRAV7/TRAJ33
Species	mouse

Antigen Details:

Item	Info
Antigen Chain	q
Antigen Type	Peptide
Antigen Organism	HOMO SAPIENS
Antigen Sequence	VVGAVGVGK
Antigen Length	9

MHC details:

Item	Info
MHC Chain	o \| p
MHC Type	MH1
MHC Species	human
MHC IMGT details	HLA-A*1101

Numbered sequence

Chain type

Chain ID

FASTA/Annotation file

IMGT numbered sequence (Framework/CDR)

FASTA file

B1	B2	B3	B4	B5	B6	B7	B8
E	A	A	V	T	Q	S	P
B9	B10	B11	B12	B13	B14	B15	B16
R	N	K	V	A	V	T	G
B17	B18	B19	B20	B21	B22	B23	B24
G	K	V	T	L	S	C	N
B25	B26	B27	B28	B29	B37	B38	B39
Q	T	N	N	H	N	N	M
B40	B41	B42	B43	B44	B45	B46	B47
Y	W	Y	R	Q	D	T	G
B48	B49	B50	B51	B52	B53	B54	B55
H	G	L	R	L	I	H	Y
B56	B57	B58	B63	B64	B65	B66	B67
S	Y	G	A	G	S	T	E
B68	B69	B70	B71	B72	B74	B75	B76
K	G	D	I	P	D	G	Y
B77	B78	B79	B80	B81	B83	B84	B85
K	A	S	R	P	S	Q	E
B86	B87	B88	B89	B90	B91	B92	B93
N	F	S	L	I	L	E	L
B94	B95	B96	B97	B98	B99	B100	B101
A	T	P	S	Q	T	S	V
B102	B103	B104	B105	B106	B107	B108	B109
Y	F	C	A	S	G	D	T
B110	B113	B114	B115	B116	B117	B118	B119
G	G	Y	E	Q	Y	F	G
B120	B121	B122	B123	B124	B125	B126	B127
P	G	T	R	L	T	V	L

FASTA file

A1	A2	A3	A4	A5	A6	A7	A8
Q	Q	K	V	Q	Q	S	P
A9	A10	A11	A12	A13	A14	A15	A16
E	S	L	I	V	P	E	G
A17	A18	A19	A20	A21	A22	A23	A24
G	M	A	S	L	N	C	T
A25	A26	A27	A28	A29	A36	A37	A38
S	S	D	R	N	V	D	Y
A39	A40	A41	A42	A43	A44	A45	A46
F	W	W	Y	R	Q	H	S
A47	A48	A49	A50	A51	A52	A53	A54
G	K	S	P	K	M	L	M
A55	A56	A57	A58	A63	A64	A65	A66
S	I	F	S	N	G	E	K
A67	A68	A74	A75	A76	A77	A78	A79
E	E	G	R	F	T	V	H
A80	A81	A82	A83	A84	A85	A86	A87
L	N	K	A	S	L	H	T
A88	A89	A90	A91	A92	A93	A94	A95
S	L	H	I	R	D	S	Q
A96	A97	A98	A99	A100	A101	A102	A103
P	S	D	S	A	L	Y	L
A104	A105	A106	A107	A108	A109	A113	A114
C	A	A	R	D	S	N	Y
A115	A116	A117	A118	A119	A120	A121	A122
Q	L	I	W	G	S	G	T
A123	A124	A125	A126	A127	A128
K	L	I	I	K	P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASGDTGGYEQY	None	11
CDRB2	SYGAGS	None	6
CDRB1	NNHNN	None	5
CDRA3	AARDSNYQLI	None	10
CDRA2	IFSNGE	None	6
CDRA1	DRNVDY	None	6

Orientation and docking angles:

Angle	Value
BC2	106.29°
BC1	72.86°
BA	-60.56°
AC2	78.49°
AC1	123.86°
dc	16.65Å
Docking angle	47.70°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
4g8e_BA	106.67°	72.72°	-60.52°	77.51°	123.85°	16.52Å	1.1
4y1a_ED	106.20°	71.83°	-60.17°	79.83°	124.12°	16.73Å	1.8
8dnt_PM	107.67°	71.80°	-59.96°	78.60°	124.64°	16.70Å	2.0
8dnt_IH	107.67°	72.60°	-59.28°	77.90°	124.75°	16.64Å	2.2
3e2h_CB	106.69°	73.41°	-60.12°	80.34°	124.94°	16.55Å	2.3

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
1nma_HL	109.88°	72.48°	-61.03°	81.63°	120.29°	16.40Å	6.0
1ghf_HL	110.63°	71.68°	-61.52°	81.98°	122.12°	16.05Å	6.1
1nmc_HL	110.09°	71.80°	-64.06°	80.19°	120.88°	16.16Å	6.3
4x4x_CD	112.33°	72.96°	-60.80°	78.66°	125.88°	15.67Å	6.5
2vxu_IM	110.96°	71.68°	-62.78°	78.60°	119.89°	16.17Å	6.6

x / w

TCR Details:

Item	Info
VB chain	x
VA chain	w
VB IMGT details	TRBV13/TRBJ2
VA IMGT details	TRAV7/TRAJ33
Species	mouse

Antigen Details:

Item	Info
Antigen Chain	v
Antigen Type	Peptide
Antigen Organism	HOMO SAPIENS
Antigen Sequence	VVGAVGVGK
Antigen Length	9

MHC details:

Item	Info
MHC Chain	t \| u
MHC Type	MH1
MHC Species	human
MHC IMGT details	HLA-A*1101

Numbered sequence

Chain type

Chain ID

FASTA/Annotation file

IMGT numbered sequence (Framework/CDR)

FASTA file

B1	B2	B3	B4	B5	B6	B7	B8
E	A	A	V	T	Q	S	P
B9	B10	B11	B12	B13	B14	B15	B16
R	N	K	V	A	V	T	G
B17	B18	B19	B20	B21	B22	B23	B24
G	K	V	T	L	S	C	N
B25	B26	B27	B28	B29	B37	B38	B39
Q	T	N	N	H	N	N	M
B40	B41	B42	B43	B44	B45	B46	B47
Y	W	Y	R	Q	D	T	G
B48	B49	B50	B51	B52	B53	B54	B55
H	G	L	R	L	I	H	Y
B56	B57	B58	B63	B64	B65	B66	B67
S	Y	G	A	G	S	T	E
B68	B69	B70	B71	B72	B74	B75	B76
K	G	D	I	P	D	G	Y
B77	B78	B79	B80	B81	B83	B84	B85
K	A	S	R	P	S	Q	E
B86	B87	B88	B89	B90	B91	B92	B93
N	F	S	L	I	L	E	L
B94	B95	B96	B97	B98	B99	B100	B101
A	T	P	S	Q	T	S	V
B102	B103	B104	B105	B106	B107	B108	B109
Y	F	C	A	S	G	D	T
B110	B113	B114	B115	B116	B117	B118	B119
G	G	Y	E	Q	Y	F	G
B120	B121	B122	B123	B124	B125	B126	B127
P	G	T	R	L	T	V	L

FASTA file

A1	A2	A3	A4	A5	A6	A7	A8
Q	Q	K	V	Q	Q	S	P
A9	A10	A11	A12	A13	A14	A15	A16
E	S	L	I	V	P	E	G
A17	A18	A19	A20	A21	A22	A23	A24
G	M	A	S	L	N	C	T
A25	A26	A27	A28	A29	A36	A37	A38
S	S	D	R	N	V	D	Y
A39	A40	A41	A42	A43	A44	A45	A46
F	W	W	Y	R	Q	H	S
A47	A48	A49	A50	A51	A52	A53	A54
G	K	S	P	K	M	L	M
A55	A56	A57	A58	A63	A64	A65	A66
S	I	F	S	N	G	E	K
A67	A68	A74	A75	A76	A77	A78	A79
E	E	G	R	F	T	V	H
A80	A81	A82	A83	A84	A85	A86	A87
L	N	K	A	S	L	H	T
A88	A89	A90	A91	A92	A93	A94	A95
S	L	H	I	R	D	S	Q
A96	A97	A98	A99	A100	A101	A102	A103
P	S	D	S	A	L	Y	L
A104	A105	A106	A107	A108	A109	A113	A114
C	A	A	R	D	S	N	Y
A115	A116	A117	A118	A119	A120	A121	A122
Q	L	I	W	G	S	G	T
A123	A124	A125	A126	A127	A128
K	L	I	I	K	P

CDR Sequences:

Loop	Sequence	Predicted canonical form	CDR Length
CDRB3	ASGDTGGYEQY	None	11
CDRB2	SYGAGS	None	6
CDRB1	NNHNN	None	5
CDRA3	AARDSNYQLI	None	10
CDRA2	IFSNGE	None	6
CDRA1	DRNVDY	None	6

Orientation and docking angles:

Angle	Value
BC2	104.72°
BC1	73.58°
BA	-61.00°
AC2	78.00°
AC1	123.40°
dc	16.40Å
Docking angle	47.05°

TCRs with similar orientations:

TCR PDB	BC2	BC1	BA	AC2	AC1	dc	TRangle Distance
7rm4_IJ	104.11°	74.07°	-60.18°	78.44°	122.39°	16.02Å	1.6
7rm4_ST	104.23°	72.87°	-60.50°	77.34°	122.23°	16.36Å	1.7
4grm_BA	104.75°	74.22°	-61.93°	76.60°	123.01°	16.23Å	1.8
7rm4_DE	103.90°	73.60°	-60.63°	78.47°	122.02°	16.02Å	1.8
3qh3_DC	103.38°	73.21°	-61.36°	77.35°	122.64°	16.34Å	1.8

Antibodies with similar orientations:

Antibody PDB	HC2	HC1	HL	LC2	LC1	dc	ABangle Distance
4yfl_FI	106.92°	71.36°	-64.48°	73.60°	120.95°	15.85Å	6.9
1nma_HL	109.88°	72.48°	-61.03°	81.63°	120.29°	16.40Å	7.1
1nmc_HL	110.09°	71.80°	-64.06°	80.19°	120.88°	16.16Å	7.3
1ghf_HL	110.63°	71.68°	-61.52°	81.98°	122.12°	16.05Å	7.5
4dcq_BA	108.30°	73.42°	-64.76°	82.94°	120.98°	16.23Å	7.6

Available downloads

Additional links and files for download: see help for more details.

Item	Link
IMGT-numbered structure	Link
Non-annotated structure from the PDB	Link
Summary file for this TCR	Link
Link in the PDB	Link